Lysinibacillus sp. SGAir0095: C1N55_17790
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Entry
C1N55_17790 CDS
T06028
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg03420
Nucleotide excision repair
lyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1N55_17790 (pcrA)
03430 Mismatch repair
C1N55_17790 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyg03400
]
C1N55_17790 (pcrA)
Enzymes [BR:
lyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N55_17790 (pcrA)
DNA repair and recombination proteins [BR:
lyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N55_17790 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
C1N55_17790 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QCR33874
LinkDB
All DBs
Position
complement(3601498..3603753)
Genome browser
AA seq
751 aa
AA seq
DB search
MEQITKNLLKGMNPQQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVVEKEVYPSKIL
AITFTNKAAREMRERIDNLLGNGTTDSMWVSTFHSMCVRILRRNIDRIGISKNFSILDTS
DQLTVVKNVLKELNIDSKRFEPRAILNAISSAKNECITADMYKTNSNPNNPYERVISQVY
EGYEKRLRRNQSLDFDDLIMTTISLFERVPDVLDFYQNKFQYVHVDEYQDTNHSQYKLVQ
LLAQKFKNICVVGDSDQSIYRWRGADIGNILSFEKDYPKAKVILLEQNYRSTQRILQAAN
DVIEHNESRYPKKLRTENLEGEKLVLYKASNEQDEAQFVVQTIQKLMEKENRSLDDFAIL
YRTNAQSRVMEEVLVKSNMTYQIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARIINE
PKRSIGATSFEKIASYAIGQDRSIFDAMKEVLFMGITGRAASSVEKFHQLIEDFTKMQDY
LSVTELVEQVIEKSGYRTMLENEKTIEAESRLENIEEFLSVTKAFEERSDDKSLIAFLTD
LSLVADIDSLDKEDTSKGSIILMTMHSAKGLEFPVVFIIGMEENIFPHSRSLDDAAEMEE
ERRLAYVGITRAEQRLYLTCAGSRTIFGRSSFNMPSRFLQEISDDIIEQISKSGNRFDED
ELPFGPGRSRAQSQRRRTIGNVQTKPQIAGLQATGGNQMEWKAGDKAVHGKWGTGTVVSV
KGDGDGLELDIAFPNVGIKRLLAKFAPITKG
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaataacgaaaaatttacttaaagggatgaatcctcagcaagctgaagcagtg
aaaacaacagaaggaccgctgttaattatggcaggtgcgggatcagggaaaacacgggtt
ttaacgcaccgaattgcttatttagttgttgaaaaggaagtctatccttctaaaatcttg
gctattacatttacaaacaaagccgctcgagaaatgcgtgaacgtatagataacctactt
ggaaacgggacaacagatagtatgtgggtgtcaacattccactctatgtgtgttcgtatt
ttgagacgcaatattgatcgaattggtatttcaaaaaatttctcgattttggataccagc
gatcaactaacagtagtaaaaaatgtcttaaaagaattgaatattgactcgaaacgtttt
gagccaagagcaatcctaaatgccataagctctgcaaagaatgaatgcattacagcagat
atgtacaagacaaatagtaatccaaacaatccatatgaaagagtcatttcgcaagtctat
gaagggtacgaaaagagacttcgccgaaaccaatcattggattttgatgatctaatcatg
acaaccatatcactttttgagcgtgtcccggatgtgctggatttctatcaaaataaattc
caatacgtacatgtcgatgagtatcaagataccaaccattcacaatataagctcgttcaa
ttattggcacaaaaatttaaaaatatctgtgtagtaggggattcggatcaatcaatctat
cgttggcgcggagcagatatcggcaatatcttatcctttgaaaaagattatccaaaagcg
aaagtaatcttgcttgagcaaaattaccgttcaacacaacgaatcctgcaagctgcaaat
gatgtcatcgagcataacgaaagccgttatccgaaaaaattaagaacagaaaatttggaa
ggggaaaagctagttctctataaagcttctaatgagcaagatgaggcacaatttgtagtc
caaacaattcaaaaactaatggaaaaagaaaatcgttcattagatgattttgctattctc
tatcgaacaaatgcccagtcccgtgttatggaggaagtactcgtaaaatcgaatatgacc
tatcaaattgtgggtggaactaagttctatgatcgtaaggagattaaagatttactagct
tatttacgattaatcgccaataacgatgatgacctttcactagcgaggattattaatgaa
ccgaaacgaagcattggggcaacttcttttgaaaaaatagcatcctatgccattggacaa
gatcgatccatctttgatgcgatgaaagaagttttattcatgggaatcacaggaagggct
gcaagtagtgtagagaagttccatcagttaatcgaggacttcactaaaatgcaggattac
ttgtcggtaactgaactagtagaacaagtgatcgaaaagtccggctaccgaacgatgctt
gaaaatgaaaaaacaattgaagcggaaagccgtttagaaaacatagaagagtttttatcg
gttacgaaggcttttgaagaacgcagtgatgataaatcgctcatcgcctttttaacggac
ttaagcttggtagcagatattgattcactggataaagaagatacatcaaaaggaagtatt
attctaatgaccatgcactctgcaaaaggattggaattccctgtagtattcattatcggc
atggaggaaaatattttcccacattcacgatcattggatgatgctgctgaaatggaagaa
gagcgtcgtctggcttatgttggcattacccgtgcagagcaacgcttgtatttaacatgt
gccggatcacgtacgatttttggacgttcaagcttcaacatgccatctcgattcctgcaa
gaaatttctgatgacattatcgagcaaatttcaaaatcaggtaatcgatttgacgaggat
gaattaccatttggtccaggaagaagccgagcacaaagtcaaagacgtcgaacaatagga
aatgtccaaacgaaacctcaaatagcgggtctacaagctactggtgggaaccagatggaa
tggaaagcaggagataaagcggtccatggtaagtgggggacaggtactgtggttagtgtc
aagggtgatggtgatggacttgaattggatattgcattccctaacgttggcattaagcgt
ttattggctaaatttgcaccaattacaaaaggttaa
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