Lysinibacillus sp. SGAir0095: C1N55_18290
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Entry
C1N55_18290 CDS
T06028
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N55_18290 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyg03019
]
C1N55_18290 (groL)
03110 Chaperones and folding catalysts [BR:
lyg03110
]
C1N55_18290 (groL)
03029 Mitochondrial biogenesis [BR:
lyg03029
]
C1N55_18290 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lyg04147
]
C1N55_18290 (groL)
Enzymes [BR:
lyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C1N55_18290 (groL)
Messenger RNA biogenesis [BR:
lyg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C1N55_18290 (groL)
Chaperones and folding catalysts [BR:
lyg03110
]
Heat shock proteins
HSP60 / Chaperonin
C1N55_18290 (groL)
Mitochondrial biogenesis [BR:
lyg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C1N55_18290 (groL)
Exosome [BR:
lyg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C1N55_18290 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C1N55_18290 (groL)
Exosomal proteins of breast cancer cells
C1N55_18290 (groL)
Exosomal proteins of colorectal cancer cells
C1N55_18290 (groL)
Exosomal proteins of bladder cancer cells
C1N55_18290 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
QCR33958
UniProt:
A0A4P8S7Q0
LinkDB
All DBs
Position
complement(3724809..3726434)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKDIKFSEEARSLMLQGVDKLANAVKVTLGPKGRNVVLEKKYGSPLITNDGVTIAKEIE
LENAYENMGAKLVAEVASKTNEIAGDGTTTATVLAQAMIREGLKNVTAGANPVGIRKGMD
KAVAAALEELQAISRPVENKEAIAQVAAISAADEEVGDFIADAMERVGTDGVITIEESKG
FTTELDVVEGMQFDRGYVSHYMVTDTDKMEAVLDNPYILVTDKKISNIQEILPLLEQVVQ
QSRPLLIIAEDVEGEALTTLILNKLRGTFNVVAVKAPGFGDRRKAMLEDIAVLTGGQVIT
SDLGLDLKTADVTTLGRAGKVVVSKDNTTIVEGAGNADEIEVRVNQIRAQIAETTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALLNV
YSAVEKVIDSVDGDVATGVRIVLRALEEPVRQIANNAGLEGSIIVDRLKREEVGVGFNAA
NGEWVNMIEAGVVDPAKVTRSALQNAASVAALFLTTEAVVADIPEPNAPALPDMGGMGGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattctctgaagaagctcgttctttaatgcttcaaggtgttgat
aaattagcgaatgcagtaaaagtaactttaggaccaaaaggacgtaatgtagttctagaa
aaaaaatacggttctccattaattacaaatgatggtgtaacaatcgcaaaagaaatcgaa
cttgaaaacgcatatgaaaatatgggtgcgaaactagtagcggaagttgcttctaaaacg
aacgaaatcgctggtgacggtacgactactgcaacagttttagcacaagctatgattcgc
gaaggacttaaaaacgtaactgcaggagctaaccctgttggtatccgtaaagggatggac
aaagctgtagcggcggcactagaagaattacaagctatttctcgtccagtagaaaacaaa
gaagcaattgctcaagttgctgcaatttctgctgctgatgaagaagtgggtgacttcatc
gcagacgctatggaacgtgtaggtactgacggtgttatcacaattgaagaatctaaaggg
tttactactgagttagatgtagtggaaggtatgcaatttgaccgtggatatgtatctcac
tacatggtaactgatactgacaaaatggaagcagtattagacaacccttatattttagtt
acagataaaaagatttcaaacatccaagaaatcttacctttacttgaacaagttgttcaa
caaagccgtccattactgatcattgcagaggatgttgaaggagaagctcttacaacatta
atcttaaataaattacgtggtacatttaacgtggtagctgttaaagctccaggcttcggt
gaccgtcgtaaagcaatgctagaagatatcgctgtattaactggtggtcaagtaatcaca
tcagatcttggtttagatttaaaaacagctgatgtaacaacattaggtcgcgctggtaaa
gttgtcgtgtctaaagacaatacaacaattgtcgaaggtgctgggaatgcagacgaaatc
gaagttcgcgtaaaccaaatccgtgctcaaattgcagaaactacttctgaatttgataaa
gaaaaattacaagaacgtcttgctaaactagctggtggagtagcggtaatcaaagttggt
gctgcaactgaaactgagctaaaagaacgtaaactacgtatcgaagacgctctaaactca
actcgtgctgctgttgaagaaggtatcgtatcaggtggtggtacagcacttctaaacgta
tactctgcagttgaaaaagttattgattcagtagatggcgatgtagcaactggtgtacgt
atcgtattacgtgctcttgaagaaccagtacgtcaaatcgcaaacaatgcaggtcttgaa
ggttcaatcatcgtagaccgcttaaaacgcgaagaagttggcgtaggctttaatgcagct
aacggcgaatgggtaaacatgatcgaagcgggtgttgttgacccagcgaaagttactcgt
tcagctttacaaaacgctgcatctgtagctgctctattcttaacaacagaagcagtagta
gcagacattccagaaccaaacgctccagcacttccagatatgggcggaatgggcggcatg
atgtaa
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