Lysinibacter sp. HNR: FrondiHNR_00030
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Entry
FrondiHNR_00030 CDS
T09375
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lyh
Lysinibacter sp. HNR
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyh03032
]
FrondiHNR_00030 (gyrA)
03400 DNA repair and recombination proteins [BR:
lyh03400
]
FrondiHNR_00030 (gyrA)
Enzymes [BR:
lyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FrondiHNR_00030 (gyrA)
DNA replication proteins [BR:
lyh03032
]
Prokaryotic type
DNA Topoisomerases
FrondiHNR_00030 (gyrA)
DNA repair and recombination proteins [BR:
lyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FrondiHNR_00030 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WGD37349
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Position
7142..9688
Genome browser
AA seq
848 aa
AA seq
DB search
MAEEITAHDHGKINQVDLQMEMQRSYLDYAMSVIVGRALPEVRDGLKPVHRRVIYGMYDG
GYRPDRAFSKCSRVVGDVMGQFHPHGDSAIYDALVRLVQPWSLRYPLAVGQGNFGSPGND
GAAAPRYTETKMSSLALEMVRDIDEDTVDFQDNYDGRTQEPTILPSRFPNLLVNGSVGIA
VGMATNIPPHNLREVSEGALWHLANPEASREELLEALMERIKGPDFPTGAQILGTQGIRD
AYTTGRGSITMRAVVSVEELQGRTCLVITELPYQVNPDNLAIKIADLVKDGRIAGIADIR
DETSGRTGQRLVIVLKRDAVPKVVLNNLYKHTQLQENFGANMLAIVDGVPRTLPLSGFIT
AWVAHQIEVIVRRTQFRLRRAEERMHILRGYLKALDALDEVIALIRRSPTVDEARDGLME
LLDVDDIQARAILDMQLRRLAALERQKIVEEADELTAKIAEYNNILVTPARQRQIVSDEL
SDIVDRFGDERRTEILMGYGGDMSIEDLIPEEEMVVTVTRGGYVKRTRSDNYRSQHRGGK
GVKGAQLRADDIVEHFFVTTTHHWLLFFTNAGRVYRAKTYEIPEGGRDSKGQHVANLLAL
QPDEQITQILDIPNYEAAQYLLLATREGLVKKTALTEYDTNRTGGIIAIKLREGDELVSA
LLANEDSDILLISRKGMSIRFTADDSALRPMGRSTSGVRGMGFREGDSLLDANTVTNDGF
VFVVTEGGYAKRTSVTEYRVQNRSGFGVKVAKLDENRGDLVGGLIVDEADEVLVVLASGK
VVRSAVAEVPAKGRNTMGVVFARFPDNDRIIGIARNSERNLETEESGDSSAQAEVVTEEN
NEGRTDEQ
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaatcacagcacacgatcacggtaagatcaaccaggttgatcttcaaatg
gagatgcagcgcagctatctcgactacgccatgagcgttattgttggccgcgccctacct
gaagttcgtgacggccttaagccggtacaccgccgggtgatctacggtatgtatgatggc
ggatatcgcccggatcgtgctttttccaagtgttcgcgcgtggttggcgatgtgatggga
cagtttcacccgcacggtgacagcgccatttatgatgcactcgttcgcctggtgcagccg
tggagccttcgctacccgttggccgtgggtcagggaaacttcggctcccccggtaacgac
ggtgccgccgccccccgatacaccgaaacaaagatgtcctctctggcgcttgagatggtt
cgggatatcgacgaggataccgtcgactttcaggacaactacgatggtcgcacgcaggaa
cccaccatccttccgagtcgattccctaatcttttggtcaatgggtcggttggcattgcc
gttggtatggccaccaatattcccccgcacaacctgcgtgaggtctcggagggtgcgctg
tggcacctggccaatcccgaggcgagccgcgaggagttgctcgaggcgctcatggagcgt
atcaaggggccagatttcccaaccggagcccagattttaggtacccaggggatccgggat
gcctacacgacgggtcgtggctccatcaccatgcgggccgtggtgagtgtcgaggaactt
cagggtcgcacctgcctcgttatcacggaacttccgtaccaggtcaacccggacaacctc
gctattaagattgccgatctggtaaaagacggaaggattgcgggaatcgcggatattcgc
gatgaaacaagcggtcgtacgggacagcgtctggtcatcgtgctcaagcgtgatgctgtt
cccaaggttgtcctcaataacctgtacaagcacacgcagctgcaggaaaactttggtgcc
aatatgctggcgattgtggacggggttcctcgcacgctccctctcagcggatttattacg
gcgtgggttgcccatcagatcgaggttattgtccgtcgcacgcagttccgtcttcgccgg
gccgaagagcgtatgcatattttgcgcggatatctcaaagcgctggatgcgctcgacgag
gttattgctttgatccgccgctcccccaccgtggacgaggcccgcgacggcctgatggag
ctgcttgacgttgatgacattcaggcccgggctatcctcgacatgcagcttcgccgtttg
gccgcactggagcgtcaaaagattgtcgaggaggcagacgagctcaccgcaaagatcgcg
gagtacaacaacatcctcgtgacaccggctcgtcagcgtcaaatagtgagcgacgagctc
agcgatattgttgatcgttttggcgatgagcgccgcaccgaaatcttgatgggatacggc
ggagacatgtcaattgaggatctcatccccgaggaagaaatggttgttacggttacgcgt
ggcggctatgtcaaacgcacccgcagtgacaactatcgtagtcagcatcgcggtggtaag
ggtgtgaagggtgctcaattgcgtgctgacgatattgttgagcacttttttgtgacaacc
acacaccactggctgctgttttttacaaacgcaggccgtgtgtatcgggctaaaacctac
gagattcctgagggaggacgtgattctaagggccagcacgtagccaatctccttgcgctg
caacccgatgagcagatcactcagatactcgatatccccaactacgaggctgcacaatat
ttgcttcttgctacgcgtgagggcctggtaaagaaaaccgccctcaccgagtacgacacc
aatcgaacgggcggaatcatcgcgattaagctgcgtgagggcgatgaactggtatcggct
cttctggcgaatgaagattccgatattcttttgatctctcgcaagggcatgtcgattcgc
tttacggcggatgacagtgcgcttcggccgatgggacgctccacaagcggtgtgcgcggc
atgggcttccgtgagggtgacagccttcttgatgccaataccgtaaccaatgacggtttt
gtctttgttgttaccgagggtggatacgctaaacgcacgagtgtgacagaatatcgtgtt
caaaaccgttcgggttttggtgttaaggtagcaaagcttgatgaaaatcgaggcgatctt
gtgggtggtttgattgtagacgaggccgatgaggtgcttgttgtgcttgcaagtggtaaa
gttgttcgttccgcggttgcggaggttcctgcgaaaggacgcaatacaatgggtgttgtt
ttcgcacgattcccagacaacgatcgtattattggaatcgctcgaaactcggagcgtaac
cttgagaccgaagaatccggtgacagcagtgctcaagctgaggttgtaacggaagaaaat
aacgaaggacgtacggatgagcaatag
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