Lysinibacter sp. HNR: FrondiHNR_00105
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Entry
FrondiHNR_00105 CDS
T09375
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05364
penicillin-binding protein A
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00550
Peptidoglycan biosynthesis
lyh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FrondiHNR_00105
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lyh01011
]
FrondiHNR_00105
Peptidoglycan biosynthesis and degradation proteins [BR:
lyh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FrondiHNR_00105
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Motif
Pfam:
Transpeptidase
PBP_dimer_2
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WGD37362
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Position
complement(21519..22991)
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AA seq
490 aa
AA seq
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MNKQIKYVTIVIFLMFFSIMTSSTIIQGFQADNLQSDARNTRAILDSYQIQRGPILVGGV
PIAESVPIDDRFRFQRVYPQGELYAPVTGYFTHTQGRTGIEGAMNDELSGANESFIDDIT
RIVTGQQQQGAAVNLTLNATAQQAAFDALENYSGAAVAFVPNTGKILAMASKPTFNPNDF
AVHDNAAILEVYNRLLEDPAGPLFNRAITGNLNHPGSTFKLVTAAAALESGQYTPGSTFP
NTGEFPLPQTNSAIRNSWRGLCGPGPTTTLETGLIMSCNTQFAQIGVDMGSEAIFNQAEK
FGFNQDLRIPLRVTPSKFNRVMNAPQSALSAIGQQDVIATPLQMAMVSASIANGGKLMKP
QLVESVINPNLSVQSEFKAEELSTALTPEIAKTLTDIMVQTVSAPNGSARPARIDGVNVA
GKTGTAENGEDSSGNPKPYTLWFTGFAPAENPQVAVAVVVEDGAGRGTAATSEEIAAPIG
KKIIEAVLNQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaacaaataaaatatgtaactatagttatatttttgatgtttttctcgatcatg
acatcctcaacgattattcaaggatttcaagccgataacctccaaagcgacgcacgcaat
actcgggcaatacttgatagctatcagatacagcgcggcccgatactggttggcggcgta
cccatcgcggaatccgttccaatagatgatcgcttcagattccagcgggtctacccccag
ggggaactatacgctcccgtaacaggctacttcacccacacccaagggcgaacgggtatt
gaaggcgccatgaacgacgagttaagcggcgcaaacgagagcttcatagacgacatcacc
cgaatagtaacgggccagcagcaacagggcgcagcggtcaacctcaccctcaacgcaaca
gcgcagcaggctgcctttgatgcactcgaaaactactccggcgcagcggttgcctttgtt
cccaacacgggcaaaattcttgcgatggcctcaaaacccacttttaatcccaacgatttt
gcggtgcacgacaatgccgcaatcctcgaagtctacaaccggcttctcgaggaccccgcc
ggacctctcttcaaccgtgccattaccggaaaccttaaccacccgggttccacctttaaa
cttgtcaccgctgccgccgcccttgaaagcggccaatacaccccggggtcaacattcccc
aacactggcgaattcccactacctcaaacaaactcagccatccgaaactcctggagaggg
ttgtgtggccccggtccaaccaccacccttgaaaccggcttaatcatgtcgtgtaacacg
caattcgctcagataggtgtggatatgggtagtgaagcgatctttaaccaggccgaaaag
tttggttttaatcaagacttacgaattcccctccgagtaacacccagcaaatttaatcgt
gtgatgaacgccccccagagcgctttgagcgccatagggcagcaagatgttatcgctact
cccctccagatggcgatggtttctgcctccatcgcaaacggaggtaaactcatgaagccc
cagcttgttgagagcgttattaaccccaaccttagcgtccagagcgagttcaaagccgag
gaactctcgacagccctcacaccagaaattgcaaagactcttacggatatcatggttcag
accgtctccgctccaaacggtagcgcaagacctgcgagaatagacggagtaaacgttgcg
ggtaaaacggggacggcagaaaatggtgaggacagcagtggaaatcctaaaccctacaca
ctctggtttactggatttgccccggctgaaaaccctcaggtagccgtggctgttgtggtt
gaagacggtgcgggacgaggaacggctgcaacatccgaagagattgctgctccaattgga
aagaaaattatagaggcggtgctaaaccaatga
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