Lysinibacter sp. HNR: FrondiHNR_02250
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Entry
FrondiHNR_02250 CDS
T09375
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
lyh
Lysinibacter sp. HNR
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lyh03000
]
FrondiHNR_02250
Transcription factors [BR:
lyh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
FrondiHNR_02250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_20
MarR_2
HTH_PafC
GntR
EutK_C
Put_DNA-bind_N
HTH_24
DUF8612
HTH_AsnC-type
PF0610-like_N
DUF977
HTH_IclR
Sigma70_r4
HVO_A0261_N
FeoC
HTH_Crp_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WGD37756
LinkDB
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Position
506685..507473
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AA seq
262 aa
AA seq
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MFAEERQSRIAEMVTANGRVTVTELAARFDITAETVRRDLDVLEAARQLRRVHGGAVTLD
RLSMAEPSLDERLTQRYDEKRRIAAVAQTLVPSGKTASVILDAGSSTELLAHLLAQWTPV
TPGDELLVITNAVPIVAQLSAHPELQLHVLGGRVRGLTRAIVGSVTEQQLASLRPDIAFI
GTNGIDSQFGLSTPDPVEAAVKTAIVKSARRTVVLADSSKLGKAALVKFADLGEIDTLIT
DAAPAGSLSGALITADVEVVVA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgccgaggaacgtcaatcacgcatagccgagatggtcacagcaaacgggcgggta
actgtcaccgaactggccgctcgattcgacattacggcagaaacggtcaggcgcgatctt
gacgtgcttgaggctgcacgccagctgcgtagggtgcacggcggagcggtaaccctcgat
cggctcagcatggcggagccgagcctcgacgaacgtctcacccagcgctatgacgagaaa
cgccgcatcgcggccgtggctcagacgctcgtgccgagcggcaaaacggcatccgttatt
cttgatgccgggtcaagcaccgaactcctcgcgcatctgcttgcgcagtggacacctgtc
acccccggcgatgaactgctcgtgatcaccaacgccgtgccgatcgtggctcagctctcc
gcgcaccccgagctacagctccacgttcttggcgggcgtgttcgcggactcacccgcgcc
attgtcggctcggtaacagagcagcaactggcttctcttcgtcccgatatcgcgtttatc
ggcaccaacggcatcgactcccagtttgggctgagcacgcccgaccccgtggaagcggcg
gtgaaaacggcgatcgttaaatcagcccggcgcaccgttgtccttgccgattccagcaag
cttggcaaggcggcgcttgttaaatttgccgacctgggcgagatcgatacgctcatcacc
gatgccgcacccgcgggttccctgagcggtgccctcattacagctgatgttgaggtggtc
gtagcgtga
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