Lysinibacter sp. HNR: FrondiHNR_03455
Help
Entry
FrondiHNR_03455 CDS
T09375
Name
(GenBank) Ig-like domain-containing protein
Organism
lyh
Lysinibacter sp. HNR
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
K319L-like_PKD
FlgD_ig
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
WGD37986
LinkDB
All DBs
Position
796538..802417
Genome browser
AA seq
1959 aa
AA seq
DB search
MIVFWIKKHLGAVISGLAAVLVLVLVVTIAIASSGYTTQRVDLGDASTWVVNDGEQAVGR
LNTQISALDTAQRSERQNLTVVQGDELVLLHAVSQRELSIVDESLASVEEGIQLPSDASE
VLLAGDTTVIHSAPSGRVWFVPNRALSNFNAESDADLVLGSNSAVAVDSTGRFVGFSASS
EMLERDVRGGGNASQSTQLSLGGEEDSYAAAVVSGRPVVLNLSTGSLSIDGRAGIQVDIA
ENPVLMSSSTASSEVYISDSRGLLRVGLNGGGEERVFTTPGNVAQPSAAPAVVGECVLAA
WPTGVAWRSCGGSEGESLNLADMDADARLTVAVRASYAVLNDEVSGRSWMIQDSGQLVDN
WDKILEELEEDQKQQENDPSIPPEIDPVQQPPVANDDVFGARPGRATPLPVLLNDYDPNG
DVIVITETANFPENMGSISIIENGQKLQVTLASDAAGTFEFQYTITDGHGGQDSATVTVE
VRGPQEKNAPVQARPTGDIVAAGGQFERDVLADWYHPDGDPLFLADAVAADPDVVTYSAQ
GTVYYKDSGSGGSQKTVGLAVSDGTLTTHGNLSVEVVAGAVPIVAETVAAVGNVGQEAIA
YPLESVRGGNGEVRLTGIPEDNLARAQLRVNTDTGEVGLTADQPGSYNLEYRVSDGTSSA
AGKLRFEITGPPNNDLPPVTVPSSVFLYLNQTETVDVLASNYDPAGGVLLLSEAHNPLEN
QGLIVEILNHGVLRVSLTEPLENGSVEFSYSVTNGHLSSRGTVTVLQVDPPAKEKPPVAT
PDQARVRVGEVVDIPVLENDLHPDNLPLTLSPDLASSLPESEGLLFASGSILRYLAPDTP
GEYTASYVVESPGGEIASAPVNISVREADAENNSAPTPRTVTSRVVQGGTVRIPIPLTGI
DADGDTVVLSGVESAPRQGIVTSTGKDYIEYEAGARSLGTDTFYYSVTDSLGAVGTGQIR
VGIMETSGVAANPIARTDVVAARPDSTLIVKPLENDSDPDGGQLRIVAVEEKQELPAAFD
DETVTLTTPSQEGVYSVLYTVQNESGGQSSAWIQVAVQRDAPPARPVVDDTVLTLTDITD
GGEKISVDVWENVFYAEGTERDLDLSLVPGWESGAEVKNTRNLEVTVAEHNQIIPFRISV
ADSPEIASHGFIWVPGTAMAVPERRTNAPELTVASGERLSININEQIIAAENKRVRITDP
STVKATNGNGANLAQNETSIDFVSAPDYWGPASVTLEVTDAPAGSNEGKRATIVLPITVT
PTSNQPPTIRGAAFTLEPALERTVDLSNLTSYPHPEDEDRLVWSQPQPVSNGATASIRGD
QLTVRVNNDTPVGTIISVPIGVRDDTSEVATANVQVTVVSSTKPKIQALPDTVELTRGSS
RTVDVLANDVGPEELRPFTVVGVEVVGTARGVTATPSADRRTITISATADADITTNLQLN
YRVQDSTGQPDRVVTGTVTAIVIDAPDAPGAPNLTSSSSFQNDGRLRFSFTAPNSNGKPI
ENYILRSTDGSVEVNCGRDSSSCVVTDGQARAGVSYQFTAIAVNSVGRSEPSAPGTSVMI
DYVPEAPTGISATVPEANSEFAPTNQGLLNVQWSPGAANRGNPASSFRVTVLDRTGGTVW
ERVVPASGSGAHGVTTDRLPYGQYSIRVESRNNIDSAKYGAVSWRSSTQSGFETRQAPSA
PEIVTSVSTDTVTANWSVAAPGGSAIRSAVAWSPVDGAPATPSCAAARNGGTQTRSDQRV
TANGVYTVSVVVWNGWACSTHSASVQYVSVPGKAGVPGVNIVREGDQGIPQISLPSVPGA
QSFVYQVNNNPYQLVPPDGRITGYDPHRANTVRVQACGAAGGGYCGPPSDASASFAPYNL
AIRWESNPALCRVGSGTVTPALHAAGTNLQYGYATSIGGPWVGDWVWGTPVPSNAAQILA
RATFTFGGATVETLTPLRTEACAPVTRIMLRPGAAIISQ
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
gtgattgttttctggataaagaagcatctcggagctgtgatcagcggcctggcggcagtg
ctagtccttgtcctggtggttaccatcgccattgcctcaagcgggtacacaacgcagcgg
gttgatcttggtgatgccagcacctgggtcgtgaacgacggtgagcaggcggttggaagg
ctcaacacgcagatatccgctctcgatacggcacagcgcagtgagcgccagaacctcacc
gtggttcagggggatgagcttgtgcttctccacgcggtctcgcagagggagctcagtatc
gtagacgagtcactcgcatctgtggaggagggtattcaactaccctccgatgcctccgag
gttcttctggcgggggataccaccgtgattcactcggcgccgagcggacgggtgtggttt
gtgcccaatcgcgcgctctccaattttaacgctgagagcgatgccgatcttgttctcggc
agcaactctgcggtggctgtcgatagtaccggacgctttgtgggcttctcggccagcagt
gagatgctggagcgcgacgtgcgtgggggcggaaatgcctcgcagagcacccagctgagt
ctcggtggcgaggaagactcttacgccgcggcggtggtgtccggtcgcccggttgttctg
aacctcagcacgggaagcctcagcattgacgggcgtgcaggcattcaggtcgatatcgcc
gagaatcccgtgctgatgagctcaagcaccgcctcctctgaggtctatatctctgattct
cgaggactgttgcgggtggggctcaacgggggtggggaagaaagagtcttcactaccccg
ggtaatgttgcgcagccgtcagccgcccccgccgttgtaggagagtgtgttcttgccgcc
tggcccacgggagtggcctggcgctcctgcgggggcagcgaaggagaatccctgaatctg
gcggatatggacgcggacgcccgcctcactgtcgctgtgcgggccagctacgcggtgctc
aacgatgaggtgagtggtcgttcctggatgatccaggactcgggtcagctcgtggacaac
tgggacaagattcttgaggaactcgaggaggatcagaagcaacaggaaaacgaccccagc
atccctcccgaaattgatccggtgcagcaaccgcccgttgcaaacgacgatgtttttggg
gctcgcccgggtcgcgcaacccccctgcccgtcctgttgaacgactacgaccccaatggc
gatgtgatagtaatcactgagaccgcgaacttccccgaaaatatgggcagcatatccatt
attgaaaacggacagaagcttcaggtaacactggcctcggatgcggcgggaacgtttgag
tttcaatacaccataaccgatggccacggcggacaggattccgcaaccgtcacggttgag
gttcgcgggccgcaggagaaaaatgcccctgttcaggctcggcccaccggtgatattgtg
gctgcgggaggtcagtttgagcgtgacgttcttgcggattggtaccatcccgatggcgac
cccctcttcctcgcggacgctgtggcggcagatccggatgtggtgacctactcagcgcag
ggcaccgtctactataaagactccggctcggggggctcacagaagacggtgggccttgcg
gtttctgacggcactctcacaacacacggaaacctcagcgttgaggtggtcgctggtgca
gtgccgatagtggcggagaccgttgccgcggtgggtaacgtggggcaggaggcaattgca
taccccctggagtcggtgcgcgggggtaacggcgaggttcggctgacggggattcccgaa
gacaacctcgcgcgcgcgcagctccgggtcaacaccgacacgggtgaggtggggctgacc
gcggatcagccgggctcctacaacctggagtatcgggtgagtgacgggacgagcagtgcc
gccgggaaattgcgctttgagatcacaggtcctcccaataacgacctgcccccggtgacg
gttcccagctcggtctttctctacctgaaccagacggagacggttgatgtcctggcctct
aactatgatcccgcgggaggcgtactactcctttctgaggcccataaccctcttgagaat
cagggtcttatcgttgagatcctgaaccacggggtgctcagggtttccctgacggagccc
ctcgagaacggaagtgtagagtttagctacagcgtcacaaacgggcacctttcctctcgc
ggcacggtaaccgttcttcaggtggatcctccggcaaaggagaaaccgcccgtcgcaacc
ccagaccaggctagagttcgggtgggggaggtcgtcgatataccggttcttgagaacgac
ctgcacccggataacctgcctctcacgctaagtcccgatctggcgagcagcctcccggag
agcgagggactactctttgcctcggggagtattttgcgctaccttgcgccggatacaccc
ggcgaatacaccgcatcctatgttgttgagagtcccggtggggagatcgcttcggcaccc
gtcaatatctccgtgcgagaagctgacgcggagaataacagcgctcccacacccaggacc
gtgacctcgagagtggtccagggcggcaccgtgcgtataccaattcccctcacgggtatt
gacgcggatggcgacaccgttgttctgagcggggtagagtcggccccgcggcagggaatc
gtgactagtaccggaaaagactacatcgagtatgaggcgggagcgcgaagcctcggaacc
gatactttttattactcggtgaccgatagcctcggtgcggtaggtaccgggcagatccgg
gtgggaattatggagacctcgggagtggcagccaacccgattgcacgaaccgacgttgtt
gccgccaggccagactccaccctcatcgtcaaaccgctggagaacgattccgaccccgac
ggcgggcagcttcgcattgttgcggtggaggaaaaacaagagcttcccgctgcctttgat
gatgagaccgtcaccctgacaacaccctcacaggagggggtctatagtgttttatatacc
gtgcagaatgagtcgggtgggcagagttcggcgtggattcaggttgcggttcagcgagac
gccccgccggctcgaccggttgttgacgacaccgttctcactctcaccgatattactgac
ggcggcgaaaagatctcggtcgacgtgtgggaaaacgtcttttacgcggagggaacggag
cgggatcttgacctttcgctcgtgccgggttgggagagcggcgctgaggtcaaaaatacg
cggaaccttgaggttaccgttgccgagcacaatcagatcatcccgtttcggatcagcgtc
gcggacagccccgagatcgcaagtcacggatttatctgggttcctggaaccgcgatggcg
gttccagaacggcgcacaaacgcccccgaacttaccgttgccagcggtgagaggctcagc
attaacattaacgaacagattatcgcggccgagaacaagagggtaagaatcacggacccc
tccacggtgaaggctaccaacggtaacggggcaaacctggcgcagaatgaaaccagcatc
gactttgtttcggcaccggactattgggggcccgcgtctgtcactcttgaggtaacagac
gctcccgcgggctctaacgagggtaaacgggcaaccattgttcttcccatcacggtgacg
cccacaagcaatcaacctcccacgattcggggtgcggcctttacccttgagcctgcgctt
gagcgcacggtcgatctgagtaatctgaccagctacccccaccccgaggacgaggaccgc
ttggtctggtcccagccgcagccggtgagtaacggtgccaccgcatcaattcgcggggat
cagctcaccgttcgggtcaacaacgacacccccgtggggacaattattagcgtacccatt
ggtgttcgagacgataccagcgaggtcgctaccgcgaacgtgcaggttacggtggtgagc
tctaccaagcccaagatccaagcgttgcccgatacagttgagcttacccgcggaagcagc
cgcacggtggatgtgctcgcaaacgacgtgggtccggaagagctgagaccctttaccgtg
gtgggggttgaggttgttggtactgctcggggggttaccgcaacccccagtgccgatcgc
cgcacgatcacgatcagtgcaaccgcggatgcagacatcaccaccaatctgcaattgaac
tatcgggtgcaagactctacgggacagcccgatcgggttgtaaccggaaccgttacggcg
attgttatcgatgcgccggatgctcccggtgctccgaacctcacgagctcctcctcgttt
caaaacgacgggcggctgcgttttagctttaccgcccccaattccaacggcaaacccatc
gagaactatattttgcgcagcaccgacgggagtgttgaggtcaactgcggtcgtgatagt
tcaagctgtgtggtcacagacggccaggcccgggccggggtcagctatcaattcacggca
atcgcggtaaattcggtcggtcggtcggagccgagcgcgccgggcacttccgtgatgatc
gactatgttccggaggcccccaccggaatcagcgcgacggttcccgaggccaatagcgag
tttgcgccgaccaatcaggggctactcaacgttcagtggtccccgggcgcggccaacagg
ggcaacccggcctcctcgtttcgggtaacggttcttgaccggacgggcggaaccgtgtgg
gagcgcgtggttcccgcctcggggtcgggtgcgcacggtgtcaccacggatcgactcccc
tacggtcagtactcgatcagagtggagtcgcgtaacaacatcgacagtgcaaaatacggt
gcggtatcgtggcggtccagtacccagtcgggatttgagaccagacaggccccctcggcg
cctgaaatcgtaacctccgtgtccaccgacacagtaaccgcaaactggagtgtggcggca
ccgggtggctcagccatccgctccgccgtggcctggtcgccggttgacggtgctcccgcc
acaccgagctgtgccgccgccagaaacggcggcacgcagacgcgaagcgatcagcgggtc
acagccaacggcgtctacacggtgagcgttgtggtgtggaacgggtgggcctgcagcacc
cacagcgcgagcgtgcaatacgtgagcgttcccgggaaggcgggggttcccggggtaaac
attgtgcgcgagggagaccagggcatcccccagatctcgctacccagcgtcccgggtgcc
cagagttttgtataccaggtcaacaacaacccctaccagcttgtgccgcccgacgggcga
atcaccggctacgacccgcaccgagcaaacaccgtgcgggtgcaggcctgtggagctgcg
ggcgggggttattgcggaccgcccagcgatgcgtcggcatcctttgccccctataatctt
gcgatccgctgggaaagtaaccctgccttatgtcgggttgggagcggcaccgtcacaccc
gcgttgcacgcggccggaactaatctccaatatgggtacgcaacctcgatcggcggaccc
tgggtcggcgattgggtctggggtactcccgtgccctcaaatgccgcgcagattcttgcg
cgggcaaccttcacctttggcggtgcaacggtagagacccttacccccttgagaacagag
gcgtgcgcgcccgttacccggataatgttgcgtcccggcgcagcgattatcagccaatag
DBGET
integrated database retrieval system
