KEGG   Lysinibacter sp. HNR: FrondiHNR_03665
Entry
FrondiHNR_03665   CDS       T09375                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
lyh  Lysinibacter sp. HNR
Pathway
lyh00260  Glycine, serine and threonine metabolism
lyh00460  Cyanoamino acid metabolism
lyh00630  Glyoxylate and dicarboxylate metabolism
lyh00670  One carbon pool by folate
lyh00680  Methane metabolism
lyh01100  Metabolic pathways
lyh01110  Biosynthesis of secondary metabolites
lyh01120  Microbial metabolism in diverse environments
lyh01200  Carbon metabolism
lyh01230  Biosynthesis of amino acids
lyh01240  Biosynthesis of cofactors
lyh04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:lyh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    FrondiHNR_03665 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    FrondiHNR_03665 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FrondiHNR_03665 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    FrondiHNR_03665 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    FrondiHNR_03665 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    FrondiHNR_03665 (glyA)
Enzymes [BR:lyh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     FrondiHNR_03665 (glyA)
SSDB
Motif
Pfam: SHMT Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: WGD38025
LinkDB
Position
851039..852322
AA seq 427 aa
MSEKLPSTFTSPLSEVDPDIARVLNQELNRQRDYLEMIASENFVPRAVLEAQGSVLTNKY
AEGYPGRRYYGGCEYVDVAESLAIQRAKDLFGAEHANVQPHAGAQANAAALYALASVGDT
ILGQELAHGGHLTHGMKLNFSGRNYSATSYGVDPDTYRVDMDIVREKALEHRPTVLIAGW
SAYPRQLDFAAFRSIADEVGAKLWVDMAHFAGLVAAGLHPSPVPHADVVTSTVHKTLAGP
RSGVILSRAEYQKKIDSAVFPGQQGGPLMHVVAAKATAFKLAGEAEFRDRQERTIRGAQI
IAERLIAPDAVANGISVLTGGTDVHLVLVDLRNSQIDGKQAEDLLHRVGITVNRNSVPFD
PRPPMVTSGLRIGTPALATRGFGDNEFAEVAEIIAAVLKPGADVESLRARTAKLTKDFPL
YPGHEEW
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgtcagagaaattaccctccacgttcacgagcccgctatccgaggtggaccccgacatt
gcgcgggtattaaaccaggagcttaatcgtcagcgcgactacctcgagatgattgcgagc
gagaactttgttccccgtgcagttcttgaggcgcaggggtctgttctcaccaataaatac
gcggaaggataccccggtcgccgctattacggcgggtgtgagtatgttgatgttgcggag
tcgctggcgattcagcgcgcgaaagatctctttggtgcagaacacgctaacgttcagccg
cacgcgggagctcaggccaacgccgccgcgctctacgctctggcttcggtcggcgatacc
atcctgggacaggagcttgcgcacggcgggcacctcacccacggtatgaagcttaacttc
tccgggcgcaactacagcgccacctcgtacggcgtagaccctgatacttatcgtgttgac
atggatattgtgcgagagaaggcgctggaacaccggcccaccgttctgattgccgggtgg
tcggcatatccgcgccaattagattttgcggccttccgctcaatcgccgacgaggtgggt
gccaagctgtgggttgatatggctcatttcgcgggtctggttgcggccggtctgcacccg
tcacccgttccgcatgcggatgttgtaacctccacagttcataagacgcttgccggtccc
cgttcgggagttatcctgagccgggccgaataccagaagaaaatcgattcggcggtgttt
ccggggcagcagggtgggccccttatgcacgttgttgcggccaaggcaaccgcgtttaag
ctggctggggaagcagaattccgcgatcgccaggagcgcaccattcgtggtgcccagatt
attgccgagcgtcttatcgctcccgatgccgtagcaaacggtatctcggttcttaccggc
ggcaccgatgttcacctggtgctggtagatttgcgtaactcccagattgacggtaagcag
gccgaagatctactgcaccgggtgggtattaccgtgaaccgcaattcggtgccgtttgac
ccccggccccccatggttacctccgggctgcgcattggaacccctgcgcttgccacgcgc
ggtttcggggataatgaatttgcagaggtcgccgagatcattgcagccgttcttaaacca
ggagccgatgttgagagcttgcgcgcacgcaccgcaaagctcaccaaagatttcccgctc
tatcccgggcacgaagagtggtag

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