Lysinibacter sp. HNR: FrondiHNR_03665
Help
Entry
FrondiHNR_03665 CDS
T09375
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00260
Glycine, serine and threonine metabolism
lyh00460
Cyanoamino acid metabolism
lyh00630
Glyoxylate and dicarboxylate metabolism
lyh00670
One carbon pool by folate
lyh00680
Methane metabolism
lyh01100
Metabolic pathways
lyh01110
Biosynthesis of secondary metabolites
lyh01120
Microbial metabolism in diverse environments
lyh01200
Carbon metabolism
lyh01230
Biosynthesis of amino acids
lyh01240
Biosynthesis of cofactors
lyh04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FrondiHNR_03665 (glyA)
09102 Energy metabolism
00680 Methane metabolism
FrondiHNR_03665 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FrondiHNR_03665 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FrondiHNR_03665 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FrondiHNR_03665 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FrondiHNR_03665 (glyA)
Enzymes [BR:
lyh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FrondiHNR_03665 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WGD38025
LinkDB
All DBs
Position
851039..852322
Genome browser
AA seq
427 aa
AA seq
DB search
MSEKLPSTFTSPLSEVDPDIARVLNQELNRQRDYLEMIASENFVPRAVLEAQGSVLTNKY
AEGYPGRRYYGGCEYVDVAESLAIQRAKDLFGAEHANVQPHAGAQANAAALYALASVGDT
ILGQELAHGGHLTHGMKLNFSGRNYSATSYGVDPDTYRVDMDIVREKALEHRPTVLIAGW
SAYPRQLDFAAFRSIADEVGAKLWVDMAHFAGLVAAGLHPSPVPHADVVTSTVHKTLAGP
RSGVILSRAEYQKKIDSAVFPGQQGGPLMHVVAAKATAFKLAGEAEFRDRQERTIRGAQI
IAERLIAPDAVANGISVLTGGTDVHLVLVDLRNSQIDGKQAEDLLHRVGITVNRNSVPFD
PRPPMVTSGLRIGTPALATRGFGDNEFAEVAEIIAAVLKPGADVESLRARTAKLTKDFPL
YPGHEEW
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaattaccctccacgttcacgagcccgctatccgaggtggaccccgacatt
gcgcgggtattaaaccaggagcttaatcgtcagcgcgactacctcgagatgattgcgagc
gagaactttgttccccgtgcagttcttgaggcgcaggggtctgttctcaccaataaatac
gcggaaggataccccggtcgccgctattacggcgggtgtgagtatgttgatgttgcggag
tcgctggcgattcagcgcgcgaaagatctctttggtgcagaacacgctaacgttcagccg
cacgcgggagctcaggccaacgccgccgcgctctacgctctggcttcggtcggcgatacc
atcctgggacaggagcttgcgcacggcgggcacctcacccacggtatgaagcttaacttc
tccgggcgcaactacagcgccacctcgtacggcgtagaccctgatacttatcgtgttgac
atggatattgtgcgagagaaggcgctggaacaccggcccaccgttctgattgccgggtgg
tcggcatatccgcgccaattagattttgcggccttccgctcaatcgccgacgaggtgggt
gccaagctgtgggttgatatggctcatttcgcgggtctggttgcggccggtctgcacccg
tcacccgttccgcatgcggatgttgtaacctccacagttcataagacgcttgccggtccc
cgttcgggagttatcctgagccgggccgaataccagaagaaaatcgattcggcggtgttt
ccggggcagcagggtgggccccttatgcacgttgttgcggccaaggcaaccgcgtttaag
ctggctggggaagcagaattccgcgatcgccaggagcgcaccattcgtggtgcccagatt
attgccgagcgtcttatcgctcccgatgccgtagcaaacggtatctcggttcttaccggc
ggcaccgatgttcacctggtgctggtagatttgcgtaactcccagattgacggtaagcag
gccgaagatctactgcaccgggtgggtattaccgtgaaccgcaattcggtgccgtttgac
ccccggccccccatggttacctccgggctgcgcattggaacccctgcgcttgccacgcgc
ggtttcggggataatgaatttgcagaggtcgccgagatcattgcagccgttcttaaacca
ggagccgatgttgagagcttgcgcgcacgcaccgcaaagctcaccaaagatttcccgctc
tatcccgggcacgaagagtggtag
DBGET
integrated database retrieval system