KEGG   Lysinibacter sp. HNR: FrondiHNR_03835
Entry
FrondiHNR_03835   CDS       T09375                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
lyh  Lysinibacter sp. HNR
Pathway
lyh00521  Streptomycin biosynthesis
lyh00523  Polyketide sugar unit biosynthesis
lyh00525  Acarbose and validamycin biosynthesis
lyh00541  Biosynthesis of various nucleotide sugars
lyh01100  Metabolic pathways
lyh01110  Biosynthesis of secondary metabolites
lyh01250  Biosynthesis of nucleotide sugars
Module
lyh_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:lyh00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    FrondiHNR_03835 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    FrondiHNR_03835 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    FrondiHNR_03835 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    FrondiHNR_03835 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    FrondiHNR_03835 (rfbB)
Enzymes [BR:lyh01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     FrondiHNR_03835 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD NAD_binding_4 RmlD_sub_bind NAD_binding_10 NmrA adh_short SelO
Other DBs
NCBI-ProteinID: WGD38058
LinkDB
Position
complement(889950..890936)
AA seq 328 aa
MKILVTGGAGFIGSNFVRRTLEDAYPGLEGSNVVVLDALTYSGNLENLTSVASSPRYRFV
KGDIRDGALLDQLLPEIDTVVHFAAESHVDRSVRDSTIFVETNVLGTQQLLDASLRNGVK
RFVHVSTDEVYGSIAEGSWSEDWPLEPNSPYSASKAGSDLLARSYYRTHGLNLSITRCSN
NYGPFHFPEKVIPLFVTNLIDDKHVPLYGEGNNIRDWLHVDDHTRGIAMVVTRGRAGEIY
NIGGGTELTNKQLTQLLLDATEKDWSYVDRVADRLGHDLRYSVDISKIQAELGYEPLVPF
EKGLADVVQWYRDNRAWWEPLKARAALD
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaagatactcgtaactggtggagctgggtttatcggatccaactttgtgcgacgcact
ctcgaagatgcctatcccggtcttgagggttcgaacgttgtcgtgcttgacgccctcacc
tattccggaaaccttgaaaatctcacctcggtagcttcctctccccgatacaggtttgtc
aagggtgatattcgcgacggtgccctgctcgaccagctccttcccgaaattgacacggtt
gtccacttcgccgcagagagccacgttgaccgctccgttcgggacagcactatttttgtt
gaaacaaatgtgctgggcacccagcagttactcgacgcctcgctccgcaacggggtgaaa
cgttttgtgcacgtctccaccgacgaggtgtacggatcaatcgccgagggatcatggtcg
gaagattggccacttgaacccaattcaccgtactccgcgtcaaaggcgggaagcgatttg
ctcgcccggagctactaccgtacccacgggctcaatctatcgatcactcgctgttccaac
aactacggccccttccactttcccgaaaaagttatccccctctttgtgaccaacctcatt
gatgataagcacgttcccctctacggcgagggcaataatattcgtgattggctacacgtt
gatgaccacacccggggtatcgccatggtggttacccgtggccgtgcgggcgagatttac
aacattggcggaggaacagaactcaccaataagcagctcacgcaactcctgcttgatgca
acggaaaaggattggagctacgtagaccgcgttgcagaccgcctcggccacgacctacgc
tactcggtagacatcagcaagattcaggctgaactcggctacgagccgcttgttcctttt
gaaaagggccttgccgatgtggtgcagtggtaccgcgataaccgggcctggtgggagccg
ctcaaggcccgcgctgccctggactaa

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