Lysinibacter sp. HNR: FrondiHNR_03935
Help
Entry
FrondiHNR_03935 CDS
T09375
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00523
Polyketide sugar unit biosynthesis
lyh01110
Biosynthesis of secondary metabolites
lyh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FrondiHNR_03935
Enzymes [BR:
lyh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
FrondiHNR_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WGD38077
LinkDB
All DBs
Position
complement(913153..914268)
Genome browser
AA seq
371 aa
AA seq
DB search
MPLQPEAKISSSQTVLITGGAGFIGCAISDELVRLFDRVIAIDNLHPQIHETEQRPVALN
AAVELRVADVTDPQAWDTLLTGIAPDVIIHLAAETGTGQSLEESSRHGDVNVGGTTQMLD
ALKRAKEQRGQPLPTRIVLSSSRAVYGEGAWKNKKDSSIFYPRQRTHSSLQQGEWDFPNA
EPTPMSAPIVFPAPVSVYGATKLAQENILTAWCNSLGVEAMILRLQNVYGPGQSLINPYT
GIMSLFCRIAMGNRSIPLYEDGEVRRDFVFIDDVASALIAAATVTTNSPIPLDIGSGEFQ
TIRSAAELIAQHYAAPPPHVTGKFREGDVRHAWTNVNNAQTVLGWQPQYTLAQGINMLAT
WIDEQPHVMPA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgccactccaaccagaagccaaaattagcagttcccaaaccgttcttatcaccggcggc
gcaggttttatcggttgcgccatttccgacgagcttgtgcgactatttgatcgagtgatc
gcaatcgataatctacacccccaaatacacgaaaccgaacagcgaccggttgctctcaac
gccgctgttgagctaagggtggcagacgttaccgatcctcaagcctgggatacgcttctg
accgggatagctccagacgttattatccaccttgccgcagagaccgggacggggcaatcc
cttgaagagtcgagtcggcacggtgatgtcaacgttggtggcacaacacagatgctcgat
gctctcaagcgcgcaaaagaacagagggggcaaccattgcccactaggatcgttctttcc
agcagccgggcagtctacggagagggcgcgtggaagaataaaaaagatagcagtattttc
tacccgcgccagcgaacccactcatccctacaacagggcgaatgggatttcccaaatgct
gagcccaccccgatgagcgctccgatcgtttttcccgctccggtcagcgtctacggggct
accaaacttgcccaagaaaatattctgaccgcctggtgtaactctttgggcgtagaggcc
atgatactgcgtttgcaaaacgtttacggcccggggcaatccctgatcaacccctatacc
ggcattatgtcgctattctgtagaatagcgatgggaaaccggtcgatcccactctatgaa
gatggcgaagtcagacgagactttgtttttattgatgatgtagcctccgccctgatagct
gccgcaaccgttactacaaactcaccaattccccttgatatcggttcaggcgagtttcaa
acgattcgaagcgcagccgaattaatcgcccagcactatgcggcgcctcccccacacgta
acaggaaagttccgagagggagatgttcgccacgcatggaccaacgtgaacaacgcacaa
accgtcctcggctggcaaccacaatacacactggcacagggcattaacatgcttgcaaca
tggattgatgaacaaccacatgtaatgcccgcctag
DBGET
integrated database retrieval system