Lysinibacter sp. HNR: FrondiHNR_03940
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Entry
FrondiHNR_03940 CDS
T09375
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00523
Polyketide sugar unit biosynthesis
lyh01110
Biosynthesis of secondary metabolites
lyh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FrondiHNR_03940
Enzymes [BR:
lyh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
FrondiHNR_03940
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
3Beta_HSD
adh_short
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
WGD38078
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Position
915640..916584
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AA seq
314 aa
AA seq
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MSQSASAQCQLGCTLITGGAGFIGAAFPSLLRNTTEVIAFDNLHPQIHATGNLLEALDSR
ATLVVGDVRSASDWNRLLSNFTPKIGVHLAAETGIGQSLTESTRYATVNVVGATQMLDGF
RCSDVMPGGIVPTSSRAIYSEGAWQDTEVTSSYPGQRSFNLEAAIFQRQNLYGPGRSLIS
SYIGIMSVFCRMAMAGKTVSLYEDGIVRRDFMLIDDVTRAVVAAAYVSAVPDLPLNIGLG
TVHTVPDAAQLISPDYSAPSPYVTEDYRLGDVRHLWVDNERAKVKLDWTPQHDPAYGIHR
FANWTNEQPDVQPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcaatcggcttcggcccagtgccaacttggatgtacgctgattacgggtggagca
ggcttcattggcgcagccttcccatctctactgcgaaatacgacggaagtaattgcattc
gacaacctacaccctcaaatccacgcgacgggaaacctgctagaggcgctggatagccgt
gcaactcttgtcgtcggagacgttagatcggcatctgactggaaccgacttctcagcaat
tttactcccaagataggtgttcacctcgctgcagaaactggtatcgggcagtcgctcacc
gaatctacacgatacgcaaccgtcaatgtggtgggcgctacccagatgctcgacgggttc
cgttgtagtgatgtgatgcccggtgggatcgtaccgacaagcagccgagctatttatagt
gaaggcgcatggcaggatacagaagtaactagcagctatcccggacagcgctccttcaac
ctggaagccgcaatctttcaacgacaaaacctctacggcccaggtcgctccctgatcagt
tcttatatcgggatcatgtcggtcttttgtcggatggcgatggcgggaaagacggtctct
ctctatgaagacggcattgttcgtcgcgattttatgttaatcgatgatgtcacccgggct
gtagttgccgcagcttatgtgtccgcagttcccgatcttcctcttaatatcggtttggga
accgtccatacagtcccggatgctgctcagctgatcagcccagactacagcgccccttct
ccttacgtaaccgaagattaccgtcttggcgatgtcagacatctttgggtagacaacgaa
cgtgccaaggtaaagctcgattggacgccccaacacgaccctgcatacgggatacaccgc
tttgccaattggaccaacgaacagcctgatgtccagcccgcatag
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