Lysinibacter sp. HNR: FrondiHNR_04885
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Entry
FrondiHNR_04885 CDS
T09375
Symbol
serA
Name
(GenBank) phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00260
Glycine, serine and threonine metabolism
lyh00270
Cysteine and methionine metabolism
lyh00680
Methane metabolism
lyh01100
Metabolic pathways
lyh01110
Biosynthesis of secondary metabolites
lyh01120
Microbial metabolism in diverse environments
lyh01200
Carbon metabolism
lyh01230
Biosynthesis of amino acids
Module
lyh_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
FrondiHNR_04885 (serA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FrondiHNR_04885 (serA)
00270 Cysteine and methionine metabolism
FrondiHNR_04885 (serA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lyh04147
]
FrondiHNR_04885 (serA)
Enzymes [BR:
lyh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
FrondiHNR_04885 (serA)
1.1.1.399 2-oxoglutarate reductase
FrondiHNR_04885 (serA)
Exosome [BR:
lyh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FrondiHNR_04885 (serA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
ACT
KARI_N
AdoHcyase_NAD
UDPG_MGDP_dh_C
NAD_binding_2
F420_oxidored
RS_preATP-grasp-like
OSA15_C
TrkA_N
ACT_AHAS_ss
TP_0666
Motif
Other DBs
NCBI-ProteinID:
WGD38254
LinkDB
All DBs
Position
1105732..1107321
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AA seq
529 aa
AA seq
DB search
MTKPVVLIAEELSPATIDSLGSDFHIVNVDGTDRAALLSEVASADAILVRSATQVDAEVL
AAAPNLKVIARAGVGLDNVDIKTATAGGVMVVNAPTSNIISAAELTVGHILSLARHIPQA
HEALSRGDWKRSAYTGTELYEKTIGIIGLGRIGALVAERLKGFGVHLVAYDPYVTSARAQ
HLGVQLVTLDELLQQADFLTIHMPKTPETTGMIGAEQLAQMKSTAYVVNVARGGLIDEDA
LYYALQQKTIAGAGLDVYVQEPPRDLPLIGLPNVVVTPHLGASTDEAQEKAGVSVAKSVR
LALEGELVPDAVNVAGGVIDPYVRPGLPLTEKLGQVFSALAHSPLTSVDIEVHGELSHHD
IKVLRLAALKGIFTNVVSEPLSYVNAPLIAEQRGIEVRLLSDEVSDAYRNVITLRGALSD
GSQISVSGTLSGPKQIEKLVEINGYDVELPFAEHMIVFTYRDRPGIVAAYGRLLGDAGIN
IAGLQIARDSEAGRALSVLSIDSPAPDELLTQVRDEILADTLRQIDIIS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaaccggtcgtgctcatagccgaagaactttcccccgcaactattgattcctta
gggtcggattttcacattgtgaatgttgatggcaccgaccgtgcggcgcttctctctgaa
gtggcctctgctgatgccattctggttcggtctgctactcaggttgacgcggaggtgttg
gcggcagccccgaaccttaaggttattgcccgagcgggcgttggccttgacaacgttgat
attaaaaccgcaactgccggtggggtaatggttgtcaatgcccccacctcaaacatcatt
agtgccgctgagctcaccgtgggtcacattctcagtcttgcacgccacattccccaggca
cacgaggcgctatccaggggagactggaagcgctccgcctatacgggcacggagctttat
gaaaaaacgatcggaattattgggctgggacgtatcggtgccctggttgcggaacgactt
aagggttttggtgtgcaccttgtggcatacgatccatatgtaaccagcgcccgtgcacag
cacctgggggtacagctggtcaccctcgacgaattgcttcagcaggctgacttccttacc
atccacatgcctaagacccccgaaaccaccggaatgattggtgctgaacaactggcgcaa
atgaagagcaccgcctatgttgttaatgtggcccgtggcggtctgattgacgaggatgct
ctgtattacgcgctacaacaaaaaactattgccggggctgggcttgacgtctatgtgcag
gaaccgccgcgtgacttgccgcttatcgggctccccaacgtggttgttacacctcatctg
ggggcctcgaccgacgaagcgcaggaaaaagctggggtgtcggttgctaaatcagtgcgt
cttgccctggaaggtgagcttgttcccgacgcggttaacgttgccggtggggttatcgat
ccctacgtccgcccggggcttcccttgacagaaaaactgggccaggttttctcggcgctt
gcgcacagtccgctcacaagcgtagacattgaggtgcacggggaactctctcaccacgac
ataaaggtactacgtttagccgcgcttaaaggaatctttaccaacgttgtgagcgagcca
ctttcttatgtaaacgcgccccttattgccgagcagcggggtatagaggttcggcttctg
agcgatgaggtttcggacgcttatcgcaacgttataaccctgcgtggtgccctgagcgat
ggatcacagatttcggtttctggaaccctcagtggacccaaacagatcgaaaagcttgtt
gagattaacggttacgatgtggagcttccttttgctgagcacatgattgtctttacgtac
agggaccgcccgggaatcgttgctgcgtacggacgtcttttgggtgatgcgggaatcaac
atagcgggacttcagattgcgcgtgactcggaggcgggtcgcgccctgagcgtcctcagt
attgactcaccggctccggatgaactccttacgcaggtgcgtgacgagattttggctgac
actctgcgccagatcgacatcattagttag
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