Lysinibacter sp. HNR: FrondiHNR_05030
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Entry
FrondiHNR_05030 CDS
T09375
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00300
Lysine biosynthesis
lyh00470
D-Amino acid metabolism
lyh01100
Metabolic pathways
lyh01110
Biosynthesis of secondary metabolites
lyh01120
Microbial metabolism in diverse environments
lyh01230
Biosynthesis of amino acids
Module
lyh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FrondiHNR_05030 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FrondiHNR_05030 (dapF)
Enzymes [BR:
lyh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FrondiHNR_05030 (dapF)
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Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WGD38281
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Position
1142114..1142992
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AA seq
292 aa
AA seq
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MTSINFVKGHGTGNDFVLFADPDGTTELTPQEIVWLCDRNFGVGADGLIRVVRSENIIDG
AQSLAEDEAAEWFMDYWNSDGSPSEMCGNGVRVFAHFLLTEGLAHNEPGETLVVGTRAGV
KDVQRNRNGYQVDMGRWKLDGGEPLVRARDLDVARPGLGINVGNPHVVVALSSVEELERL
DLSSAPQLTPEVPHGANVEFVVPGDPPVADGVGQVRMRVHERGSGETLSCGTGAVAAALA
VRHWAGKNAPHHWRVDVPGGRVAVRMFPTEEGEHVALSGPAELVFRGTVTLP
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcatcaactttgttaaagggcacggaacgggcaacgactttgtgctgtttgcc
gacccagacggaaccaccgagcttaccccgcaggaaatcgtgtggctctgtgaccgtaac
tttggtgttggtgctgatggtcttatccgtgttgtgcgttcggaaaacattattgatggg
gcacaatcactcgccgaagacgaagctgcggagtggttcatggactactggaattctgac
ggttcgccctctgagatgtgcggcaacggcgtgcgtgtctttgcccattttctacttacc
gaaggcctcgctcataacgaaccgggggagaccctagttgtgggtacaagagctggagtg
aaggatgtccaacgcaatagaaacggatatcaggttgatatggggcgctggaagctcgac
gggggagaacctctggttcgggcgcgcgacctggatgtggccaggccgggcctcggaatc
aacgtgggcaatccccacgtggtggtggcactatcaagtgtagaagagcttgagaggctt
gatctcagctccgctccgcagctcacgccggaggtcccccacggtgcaaacgtggagttt
gtggttccgggggatcctcccgttgctgacggtgtgggtcaggtgaggatgcgtgttcat
gagcgtggcagcggggaaaccctctcgtgtggcacgggagctgttgccgctgcgcttgct
gtccgccactgggcaggaaaaaatgccccccaccactggagggtggatgttcccgggggg
cgcgtcgcagtacggatgtttcccaccgaagagggtgaacacgttgctctctcgggtccg
gcggagctggtgttccgcggaacggtcacccttccgtag
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