KEGG   Lysinibacter sp. HNR: FrondiHNR_05030
Entry
FrondiHNR_05030   CDS       T09375                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
lyh  Lysinibacter sp. HNR
Pathway
lyh00300  Lysine biosynthesis
lyh00470  D-Amino acid metabolism
lyh01100  Metabolic pathways
lyh01110  Biosynthesis of secondary metabolites
lyh01120  Microbial metabolism in diverse environments
lyh01230  Biosynthesis of amino acids
Module
lyh_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:lyh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    FrondiHNR_05030 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FrondiHNR_05030 (dapF)
Enzymes [BR:lyh01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     FrondiHNR_05030 (dapF)
SSDB
Motif
Pfam: DAP_epimerase CntK_N
Other DBs
NCBI-ProteinID: WGD38281
LinkDB
Position
1142114..1142992
AA seq 292 aa
MTSINFVKGHGTGNDFVLFADPDGTTELTPQEIVWLCDRNFGVGADGLIRVVRSENIIDG
AQSLAEDEAAEWFMDYWNSDGSPSEMCGNGVRVFAHFLLTEGLAHNEPGETLVVGTRAGV
KDVQRNRNGYQVDMGRWKLDGGEPLVRARDLDVARPGLGINVGNPHVVVALSSVEELERL
DLSSAPQLTPEVPHGANVEFVVPGDPPVADGVGQVRMRVHERGSGETLSCGTGAVAAALA
VRHWAGKNAPHHWRVDVPGGRVAVRMFPTEEGEHVALSGPAELVFRGTVTLP
NT seq 879 nt   +upstreamnt  +downstreamnt
atgaccagcatcaactttgttaaagggcacggaacgggcaacgactttgtgctgtttgcc
gacccagacggaaccaccgagcttaccccgcaggaaatcgtgtggctctgtgaccgtaac
tttggtgttggtgctgatggtcttatccgtgttgtgcgttcggaaaacattattgatggg
gcacaatcactcgccgaagacgaagctgcggagtggttcatggactactggaattctgac
ggttcgccctctgagatgtgcggcaacggcgtgcgtgtctttgcccattttctacttacc
gaaggcctcgctcataacgaaccgggggagaccctagttgtgggtacaagagctggagtg
aaggatgtccaacgcaatagaaacggatatcaggttgatatggggcgctggaagctcgac
gggggagaacctctggttcgggcgcgcgacctggatgtggccaggccgggcctcggaatc
aacgtgggcaatccccacgtggtggtggcactatcaagtgtagaagagcttgagaggctt
gatctcagctccgctccgcagctcacgccggaggtcccccacggtgcaaacgtggagttt
gtggttccgggggatcctcccgttgctgacggtgtgggtcaggtgaggatgcgtgttcat
gagcgtggcagcggggaaaccctctcgtgtggcacgggagctgttgccgctgcgcttgct
gtccgccactgggcaggaaaaaatgccccccaccactggagggtggatgttcccgggggg
cgcgtcgcagtacggatgtttcccaccgaagagggtgaacacgttgctctctcgggtccg
gcggagctggtgttccgcggaacggtcacccttccgtag

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