Lysinibacter sp. HNR: FrondiHNR_05455
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Entry
FrondiHNR_05455 CDS
T09375
Name
(GenBank) ABC transporter ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh01501
beta-Lactam resistance
lyh02010
ABC transporters
lyh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FrondiHNR_05455
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FrondiHNR_05455
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FrondiHNR_05455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyh02000
]
FrondiHNR_05455
Transporters [BR:
lyh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
FrondiHNR_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_29
AAA_22
AAA_16
DUF87
nSTAND3
NACHT
Sigma54_activat
AAA_23
AAA_25
ATP-synt_ab
RsgA_GTPase
NB-ARC
Mg_chelatase
APS_kinase
nSTAND1
DO-GTPase2
DUF3987
Zeta_toxin
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
WGD38358
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Position
1234415..1236139
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AA seq
574 aa
AA seq
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MAQTSQTNGAEPLLQLRNVEIDFSTQDGPVKAVKGIDLTVNYGETVAIVGESGSGKSTTA
MSIIDLLPGTGKVTGGEILFEGKNIVGASARTMQGIRGRHIGLVPQDPMSNLNPVWSIGF
QVEEALKANGFEGDKAARKARVIEVLENAGLADAKSRLRQYPHQFSGGMRQRALIGIGLA
ANPKLLIADEPTSALDVTVQKRILDHLGTLTGDAGTAVLFITHDLGLAAERAEKLVVMYQ
GQVVESGPSVEILTNPRHPYTQRLVAAAPSLASRRITRDIPLEQDAGGAGSLREVAVQVH
EVQEAAASSKPDFISVKNLNKVYKIRQGGFKTQELQAVKDVSFDIARGTTTAIVGESGSG
KSTVAKMVLQLEEKTSGNITFDGRLLEKLSRSDLLQFRRRVQPVFQDPYGTLDPMYTVGN
TIAEPLKTHKIGDKSSQLSRVRELLDQVALPSAMINRYPNELSGGQRQRIAIARALALQP
EVLVLDEAVSALDVLVQGQILNLLADLQHELDLTYLFITHDLAVVRLIADNVCVMKQGEI
VEAENTDVVFDNPREEYTRDLLAAIPGANIQLGV
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcccagacgtcacagacaaacggtgcagaaccgcttctgcagctccgtaacgtggag
atcgatttttctactcaagatggaccggtaaaggcggttaagggaatcgacctgaccgta
aactacggtgagaccgtggctattgtgggggagtccggatcaggaaaatccaccacggcc
atgtcaatcattgatctcctaccgggaaccggaaaggtcaccgggggagagatcctattt
gaaggtaaaaacattgtgggggcctcggctcgtacgatgcaggggattcgtggtcgacac
atcgggctcgttccgcaggaccctatgtcaaacctcaaccccgtgtggagcatcgggttt
caggtggaggaggccctcaaagccaacggttttgagggcgataaggctgcgcgcaaggcc
cgggtgatcgaggttctcgaaaatgccggacttgcggatgccaagtcgcgactccgtcag
tatccacatcagttctcaggtggtatgcgccagcgcgccctgattggaatcggcctggcc
gcaaaccccaagcttttgattgcagacgagcccacctccgccctggacgtgaccgtgcaa
aagcgtattcttgaccacctgggaaccctcaccggcgatgcgggaaccgccgtgctcttt
attacccacgatctgggtctcgccgcggagcgcgccgaaaaacttgttgtgatgtaccag
gggcaggtggttgagtccgggccgtcagtggagattctcaccaacccccggcacccctac
acgcagcgtctggttgccgcggccccgtcgctggcctccaggcggattactcgagacata
ccgcttgaacaggatgcgggcggagcgggtagcctgcgtgaggtagcggttcaggtgcac
gaggtacaggaggccgccgccagttcgaagccagacttcattagcgttaaaaaccttaat
aaggtttataagattcgccagggtggatttaaaacccaagaactgcaggctgtgaaggat
gtttcctttgatattgcgcgcggtaccacgactgctatcgtgggtgagtccggttcgggt
aagtcaacggtggccaagatggtgcttcagctcgaggagaagacctcgggaaatattacg
tttgatggcaggcttctcgaaaagttgagccgctccgatctgcttcagtttcggcgacgg
gtacagccggtgtttcaggatccctacggtactcttgaccccatgtatacggtgggtaac
accattgccgaaccgcttaaaacgcataaaattggcgataaatcgtctcagctgagccgg
gtccgggagcttcttgaccaggttgctctgccctccgcgatgattaatcgataccccaac
gaactctccggcggccagaggcagcgtattgcaattgcccgggcactggcgcttcagcca
gaagtacttgtgctggatgaggcggtttcagccctggacgttctggtgcaggggcagatt
ctgaatctgctcgccgacctgcagcacgagttagacctcacctatctctttatcacccac
gacctagcggtggtgcgcctcatcgcagacaacgtgtgtgtgatgaagcagggtgaaatt
gttgaggcggaaaacaccgatgttgtgtttgataacccgcgtgaggagtacactcgtgat
cttcttgccgctattcccggagccaatattcagcttggtgtttag
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