Lysinibacter sp. HNR: FrondiHNR_05665
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Entry
FrondiHNR_05665 CDS
T09375
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00250
Alanine, aspartate and glutamate metabolism
lyh00280
Valine, leucine and isoleucine degradation
lyh00310
Lysine degradation
lyh00410
beta-Alanine metabolism
lyh00640
Propanoate metabolism
lyh00650
Butanoate metabolism
lyh01100
Metabolic pathways
lyh01120
Microbial metabolism in diverse environments
Module
lyh_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FrondiHNR_05665 (gabT)
00650 Butanoate metabolism
FrondiHNR_05665 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FrondiHNR_05665 (gabT)
00280 Valine, leucine and isoleucine degradation
FrondiHNR_05665 (gabT)
00310 Lysine degradation
FrondiHNR_05665 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FrondiHNR_05665 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lyh01007
]
FrondiHNR_05665 (gabT)
Enzymes [BR:
lyh01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
FrondiHNR_05665 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
FrondiHNR_05665 (gabT)
2.6.1.48 5-aminovalerate transaminase
FrondiHNR_05665 (gabT)
Amino acid related enzymes [BR:
lyh01007
]
Aminotransferase (transaminase)
Class III
FrondiHNR_05665 (gabT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
DUF4147
Motif
Other DBs
NCBI-ProteinID:
WGD38397
LinkDB
All DBs
Position
1281365..1282705
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AA seq
446 aa
AA seq
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MNAPLGGPTLAQERKLVTSIPGPRSQEWSARKSHAVSDGVSVGLPVYTVAAGGGVIVDAD
GNSLIDLGSGIAVTGVGNSAPRVVQAVQDAVAQFTHTCFMVTPYDSYVRVAEKLNELTPG
EHPKRSALFNSGAEAVENAIKIARQYTKKTAVVAFDHAYHGRTNLTMGLTAKNMPYKSGF
GPFASDIYRAQVSYPFRDGALSGAEAAKIAIDQIEKQVGAENLAAIIIEPILGEGGFIVP
ADGFLNALVDWARDNNVVFIADEVQTGFARTGKMFASEHYGIVPDLITTAKGIAGGLPLS
AVTGRQEIMDATHPSGLGGTYGGNPIACAAALATIETYIEEKLDDRAVEIEHTIREHFVR
LQDTDARIGDIRGRGAMMAVEFVKEDGITPDPGLTAAIARHSHQNGVVVLTCGTYGNVIR
FLPPLSISNALLMEGLDVVAEALSVS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccactcggaggacccaccctcgctcaggaacgcaagctggttacctcgatt
cccggacctcgttcacaggagtggtccgcccgtaagtctcacgccgtatccgacggggtg
agcgtggggctccctgtgtatacggtcgccgccggcggtggcgtcattgttgacgcagac
ggtaactcactgattgatcttggctcgggaatcgcagtcaccggcgtgggcaacagtgcc
cctcgtgttgtccaggccgttcaggatgccgtagcgcagtttacccatacctgctttatg
gtaaccccctatgactcctatgtgagagtcgccgaaaaactcaacgagctgaccccgggt
gagcacccaaagcgttccgccctgttcaactcgggggcggaagcggttgaaaacgcaatc
aaaattgcgcggcaatacaccaaaaaaacggctgttgttgcgttcgaccatgcctaccac
ggacgtaccaacctcaccatgggtctcaccgcaaagaacatgccctacaagagtggtttt
ggcccctttgcctcagatatttaccgcgctcaggtctcctaccccttccgcgacggcgca
ctctcgggagccgaagccgctaaaatcgcgatcgatcagatcgaaaaacaggttggtgcc
gaaaaccttgccgctatcattatcgagccaatcctcggggagggcggtttcattgtcccc
gcagacggtttcctgaacgccctcgtcgactgggcgcgtgacaacaacgtggtttttatc
gcggatgaggtgcaaaccggctttgctcgcacggggaaaatgtttgcctcggaacactac
ggtatcgtccctgacctcatcaccacggcaaagggaatcgccggtggccttcccctttcg
gccgttaccggacgccaggagattatggatgccacacaccccagcggactcggtggaact
tacggcggaaatcccatcgcgtgtgcggctgccctggccacaatcgaaacctatatcgaa
gagaaacttgatgaccgtgcggttgagattgagcacactatcagggagcactttgttcgg
ttgcaagatacggacgctcgtattggtgatatccgcggacgcggtgccatgatggccgtc
gagtttgttaaagaagacggcatcacacccgaccccgggctcaccgcggctatcgctcgg
cattcacaccagaacggggttgttgtgcttacctgtggaacctacggaaacgtcatccgt
ttcctccctccgctctccatcagcaacgcgctccttatggagggcctcgatgtggttgcc
gaagctctcagcgttagctag
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