Lysinibacter sp. HNR: FrondiHNR_05725
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Entry
FrondiHNR_05725 CDS
T09375
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
lyh
Lysinibacter sp. HNR
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lyh03036
]
FrondiHNR_05725 (smc)
Chromosome and associated proteins [BR:
lyh03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FrondiHNR_05725 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
AAA_29
CCDC39
ABC_tran
SEEEED
Motif
Other DBs
NCBI-ProteinID:
WGD38406
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Position
1295763..1299416
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AA seq
1217 aa
AA seq
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MHLKSLTLKGFKSFAQPTSFIFEPGVTAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK
MEDVIFAGTSTRGPLGRAEVQLIIDNSDGALPIEYTEVAISRTLFRNGASEYAINGETCR
LLDVQELLSDSGLGREMHVIVGQGQLDAVLRATPEERRGFIEEAAGILKHRRRKEKTVRK
LDAMETNLTRLGDLAGEIRRQLKPLGRQAEVAREAQTIAAEVRDSKARLLADDVVTLRRE
LEEFNRGEASRHSERIVLQEQLEQKQLRIARIEQQQVGDSVDRARQTTYALEAIEERLRG
LFTLAHQRLSLLGSQADMPDLAPRVTQSSVADAELELEDLADMVPEAEERWQEAQHGTGI
AREALDAIDEHIAAQSALMSSHDLEISKLTGQRDAAQTRLSTVRDEVLRQQKAFEEAQQR
HAVAMQEHAIFAEQSEHGLEHDQDLDDAYHRAQKTVSAAEAEIERLRDLLHGHEREREAL
ASRVSALSLALDRKDAGAALLTREHPGLQGRVAEHVRVQPGYETAIGAALGTLGEAILAR
DHDSAYDAVAHAEAHDLGRVDLVIESAPHTLIDASDITGVVSAASVVSAPGGVLGILSHT
LIAEDLGSAREAAATIVRRADLALVTIVTLSGDVLTQQAVRGGSGNSPSRVELVADRDSA
AERLVEVEKTITTARYELTEQRETVKISKEQAAQALSALRENDAAQAAVSEKLNRFRIQA
EASAAEAERLELGLSVAATAVEEAEQSLASAMQALDEAASRPRPILDVSERDALQAELEE
ARSAEVDARLGFETARERIRAAQERVDGLRTQYEREREQAEEAARLAVIRARQMAIAHEV
ASALPEVLDSVGRSVAEARIVQKRAEEERAAQNAELTGLRREEAEIRDRLRVLTDDVHTL
ELQIYEKKLGLSSLLERAGSEFGLVEEVLIAEYGPDQLIHVGGKQEPEAVLESESESGSE
SESGSESESGSESAPGSESRSGVSTDTEGTPYVRADQEKRLRQAERKLSELGRVNPLALE
EFAALEQRHNFLAEQLADLKNTRADLLTIIGELDEKMEGIFTEAFEDTKAAFGEVFPVLF
PGGTGDISLTDPDNMLTTGIEVSVRPVGKKIERLSLLSGGERSLAAVALLIAIFKARPSP
FYIMDEVEAALDDANLGRLLTIFQDLREHSQLIVITHQKRTMEIADALYGVSMRQDGVSA
VVGQKIAREESVVEPTE
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
gtgcatctaaagagcctcacgctcaagggattcaaatcgtttgcccaaccaacctccttt
atctttgagcccggtgttaccgccgtggtgggccccaacggctccggcaaaagcaacgtg
gtagacgcgctcgcctgggtgatgggggagcagggggctaaaactctgcggggcggcaag
atggaagacgtcatctttgccggaactagcacccgcgggccgctcgggcgtgccgaggtg
caactcatcatcgataactccgatggcgctcttccgattgagtacacagaggttgccatc
agccgtacgctttttcgcaacggtgcaagcgagtacgccattaacggtgagacctgccgc
cttcttgacgtgcaggaactcctctcagattctggtttggggcgagaaatgcacgttatt
gtgggtcagggacagcttgatgcggtgttgcgggccacacccgaggagagacgcggtttc
attgaggaggctgcgggtattctgaagcatcgacgccggaaagaaaaaacggttcgtaaa
ctcgatgctatggagacaaacctcacccggctgggcgatttggcgggcgagattaggcgt
cagctgaagccgcttgggcgtcaggccgaggtcgctcgtgaggctcaaacaatagcggcc
gaggttcgcgattccaaggctcgtttgcttgcggatgacgtggtaaccctgcgccgtgag
cttgaggagtttaaccgaggtgaggcctcacggcacagtgagagaatcgtccttcaggaa
cagctagagcaaaaacaattacgcattgcccgtattgagcaacagcaggtgggggattcc
gttgatcgggcgagacagaccacgtatgctctggaggcgatagaggagaggcttaggggt
ctcttcaccctcgcccaccagaggctttcgctgctcggtagccaggcggacatgcccgat
ctggcgccgcgtgttactcaaagctcggtggcggatgccgagcttgagcttgaggacctg
gccgatatggttcccgaggctgaagagcgctggcaggaagcgcagcacggcacgggtatt
gctcgcgaggcgcttgatgctattgatgagcatattgctgcgcagagtgcactcatgtcg
agtcacgatcttgaaatatccaagctcaccggccagcgtgatgctgctcaaacccggttg
agtaccgtgcgcgatgaggtgctgcggcagcaaaaagcgtttgaggaggcgcagcagcgt
cacgcggtagcgatgcaggagcacgctatcttcgcggagcagagcgaacacggccttgag
cacgatcaggatcttgacgatgcgtatcatcgcgcgcaaaaaacggtgagtgcggccgag
gcagagattgagcggttacgtgacctccttcacggtcacgagcgtgagcgtgaagcgctt
gcctccagggtgagcgcgttatcgctggcccttgatcgaaaagatgccggagcagccctg
ctcactcgagagcaccccgggcttcagggtcgggttgcggaacacgtcagggtgcagccg
gggtacgagaccgcgattggcgctgctctgggtacgctgggcgaggcgattcttgcccgt
gatcacgactctgcttatgacgctgttgcccacgcagaggctcacgatcttggccgggtt
gatcttgtgatcgagagcgccccacacaccctgattgatgcttcagacattacgggtgtg
gtatctgcggcgtccgtggtgagcgcccccggcggtgtgctcggcatactttcacacacc
ctcattgcggaggatctcggcagcgcccgagaggctgccgccactatcgtgcgtcgtgcc
gatcttgcgctggtcacgattgtgacgctcagcggagatgttctcacccagcaggctgtg
cgtggggggtcaggaaactctcccagccgggttgaacttgtggccgatagggactccgcc
gcggagcgtttggtcgaggtggaaaaaaccattacgaccgcgcgctacgagcttacagaa
cagcgggaaaccgtgaaaatatcgaaagaacaggcggctcaggcgctgtctgctctccgt
gaaaatgatgcggcgcaggccgcggtgagcgaaaagctcaatcggttccggattcaggct
gaggcgagtgctgccgaagcggaacgtcttgagctgggcctgagcgtggcggcaactgcg
gtagaggaggccgagcagagcctagcctcggcgatgcaggccctggatgaggcagcttcg
aggccgcgcccgattctcgatgtgagcgagcgtgacgcgctgcaagcggaacttgaggag
gcacggtctgccgaggtggatgctcgtctgggctttgaaaccgcgcgtgagcgcatccgc
gccgctcaggaacgagtagacggtttacgcacacaatacgaaagggagcgcgagcaggcc
gaggaggcggcgcgtctggccgtcatccgggcgcgtcagatggctattgctcacgaggtg
gcctcggctcttcccgaggtgctcgactcggtggggcgctcggtggcggaggcacgtatt
gtgcagaagcgagcggaggaggaacgggccgcgcagaacgccgaactcaccggactgcgg
cgtgaggaggcagagatccgtgatcgtctccgggtcttgaccgacgatgttcacactctt
gagcttcagatctacgagaagaagctggggctttccagtctgctggagcgggccggcagc
gagtttggcctggtggaggaggttctgatagccgagtacgggccggatcagctgattcac
gttggagggaagcaagagcccgaggctgttttggaatctgagagtgagtctgggtctgag
tctgagtctgggtctgagtctgagtctgggtctgagtctgcccccgggtctgagtctcgc
tccggagtctcgacggataccgaaggcactccttatgtccgtgccgatcaggaaaaacgc
ctgcgtcaggccgagcgtaaactttccgaactgggaagagtaaacccgcttgccctggaa
gagtttgccgctcttgagcagcgccataactttctcgccgaacagctggccgatctgaaa
aacaccagggctgacctgctcaccattatcggcgaacttgacgagaagatggagggcatt
tttaccgaggcatttgaagataccaaagccgcttttggtgaggtgtttccggttctcttc
ccgggaggaacgggtgatatctctctcaccgatcccgacaatatgctcacaacgggcatt
gaagtgtcggtgcgtcccgtgggtaaaaagattgagcgtctctccctgctctcgggtggg
gaacgttctctggctgcggtcgctctgctcatcgcgatttttaaagctcgccctagtccc
ttctacatcatggatgaggtcgaggccgctctggatgacgccaacctgggtcgtctactc
accatttttcaggaccttcgggagcactctcagctcatcgttatcacccaccagaagcga
acaatggagatcgcggatgccctgtacggtgtgtccatgcggcaggatggtgtctccgcc
gtggtgggacaaaagatcgcgcgagaagaatccgtagtggaacccaccgagtaa
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