Lysinibacter sp. HNR: FrondiHNR_05750
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Entry
FrondiHNR_05750 CDS
T09375
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh02024
Quorum sensing
lyh03060
Protein export
lyh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FrondiHNR_05750 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FrondiHNR_05750 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FrondiHNR_05750 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lyh02044
]
FrondiHNR_05750 (ffh)
Enzymes [BR:
lyh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FrondiHNR_05750 (ffh)
Secretion system [BR:
lyh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FrondiHNR_05750 (ffh)
Eukaryotic Sec-SRP protein
FrondiHNR_05750 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
AAA_31
cobW
AAA_24
AAA_22
Zeta_toxin
MMR_HSR1
AAA_30
ArsA_ATPase
APS_kinase
MeaB
AAA_18
AAA_33
6PF2K
Thymidylate_kin
MobB
TsaE
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WGD38411
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All DBs
Position
1303014..1304573
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AA seq
519 aa
AA seq
DB search
MATFGNLSDRLADTFKNLRTKGKLSASDVDGTVREIRRALLDADVALDVVKGFTGSVRER
ALSDEVNRALNPAQQVVQIVNEELIQILGGQQRRLEFAKNPPTVIMLAGLQGAGKTTLAG
KLSRWLAGEGHKPLLVAADLQRPNAVTQLSVVAEQAGVAIFAPEPGNGVGDPVRVAKDSI
TYANDKMYDVVIVDTAGRLGVDAELMKQAADIRRAIDPDEVLFVIDAMIGQDAVNTAKAF
QEGVDFTGVVLTKLDGDARGGAALSVASVTGRPIIFASTGEGLDDFEPFHPDRMASRILD
LGDMLTLIEQAQRSFDEEEARKVAEKFATDTFTLDDFLKQMQQLRNMGNIKKMMGMLPGM
GQMREQLDNFDEKEIGRTEAIIQSMTPAERANPKLLNGSRRLRIARGSGATVTDVNGLVN
RFEQAAKMMKTVAKGGMPQIPGMGPVPGGGFGGGKRKNAKSKKKGSRSGNPAKRALDAQS
AAAEPPQTSGSGFGLGKAPGKSQGPTEEEMAALQRMMGK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctacttttggaaatctctcggatcggcttgccgacacatttaaaaaccttcgcacg
aagggaaagctctctgcctcggatgtcgacggcaccgtgcgcgaaattcgccgcgcgcta
cttgatgccgacgttgccctcgacgttgtgaaggggtttacaggctcggtgcgtgagcgt
gccctcagcgatgaggttaacagggcgttgaaccccgcgcagcaggttgtccagatcgtc
aacgaggagctcattcagattctgggtggccagcagcgccgtctggaatttgcaaaaaat
ccacccacggtgatcatgcttgcgggccttcagggagcaggtaaaactaccctggcgggc
aagctctcacggtggctcgcgggagagggtcacaaaccgctcctcgttgcagcggacctg
cagcgacccaacgccgtgacccagctgagcgttgtcgctgagcaggccggcgtagccatt
tttgcgccggaaccaggcaacggcgttggtgatcccgtgagagtcgcaaaagactccatt
acctacgcaaacgacaaaatgtacgatgtggttatcgtcgacacggccgggcgcctgggc
gtagatgcagagctcatgaagcaggccgcagacattcgtcgggcaatagaccccgacgag
gttctttttgttattgacgcgatgattgggcaagacgcggttaatacggcaaaggccttt
caggagggcgtcgactttaccggcgtggtcctcacaaagctcgacggtgatgcccgaggt
ggtgccgcgctctccgtggccagtgtgaccggacgcccgattatctttgcctccacgggt
gaggggcttgacgactttgagccgttccaccccgatcgtatggcaagccggatccttgat
ctgggagacatgctcacgctcatcgagcaggcgcagcgatcctttgacgaggaagaggct
cgtaaggttgccgaaaagttcgccaccgatacttttactctcgatgattttctcaaacag
atgcagcagttgcgcaacatgggaaacatcaagaagatgatgggtatgcttcccggaatg
ggacagatgcgtgagcagcttgataattttgatgaaaaagaaatcgggcgcaccgaggcc
atcatccagtcgatgaccccggcggaaagagccaaccccaagcttctgaacggttcgcgc
aggctgcgtattgcgcggggttccggggcgaccgtgaccgacgtcaatggtctggtaaat
cgctttgagcaggcagccaagatgatgaaaacggtggccaagggaggcatgccccagatc
ccgggcatgggcccggtccccggtggtggttttggtggcgggaagcgcaagaacgcaaag
tcaaagaaaaaaggctctcgctcgggcaaccctgcaaagcgtgctcttgacgcgcaatca
gcagcagccgaacctcctcagacctcaggctccggatttgggcttggaaaagctccgggg
aagtctcaggggccgaccgaggaggagatggccgcgctgcaaagaatgatgggcaaatag
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