Lysinibacter sp. HNR: FrondiHNR_06835
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Entry
FrondiHNR_06835 CDS
T09375
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh03030
DNA replication
lyh03430
Mismatch repair
lyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FrondiHNR_06835
03430 Mismatch repair
FrondiHNR_06835
03440 Homologous recombination
FrondiHNR_06835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyh03032
]
FrondiHNR_06835
03400 DNA repair and recombination proteins [BR:
lyh03400
]
FrondiHNR_06835
Enzymes [BR:
lyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FrondiHNR_06835
DNA replication proteins [BR:
lyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FrondiHNR_06835
DNA repair and recombination proteins [BR:
lyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FrondiHNR_06835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WGD36204
LinkDB
All DBs
Position
complement(1515290..1515991)
Genome browser
AA seq
233 aa
AA seq
DB search
MTENSVPLWCQNLAVFDTETTGINTSEARVVTATLAVLDAQGAVTERHDWFINPGVEIPE
RATSVHGVTTAQAVAGGMDAATGIGQILDRIRELFLRGLPLVIYNAPYDLDVIRYEALRY
GIEPLAAPAPVLDPLIIDKAVDRYRKGKRTLEAACMHYGVVLGSAHDAGEDAIASGRVMQ
QIAARYVSKIPEDLEEIHRSQVVWAQEQAENFQEYMRRRNPQFVADGAWPERL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaactctgtgcctctctggtgccaaaatctcgccgtctttgacaccgaaacc
acgggaattaacacctccgaggcccgtgtcgtcaccgctacacttgcggttttagatgca
cagggggctgtaaccgaacggcacgactggtttattaatccgggtgtcgagattcctgaa
agagccacttccgttcacggtgttacaacggcgcaggcggtagccggcggaatggacgcc
gcaacgggcataggccaaatactagatcgtattcgtgagctttttttacgcggactcccc
ctcgtgatctataacgcgccctacgaccttgatgttattcgttacgaagccctcaggtac
gggatagaacccctcgcggcccccgctcccgtacttgatcccctcattattgataaagcg
gtggatcgctatcgcaagggcaaaagaacgctcgaggcagcttgcatgcactacggggtt
gtcttgggcagtgcacacgacgcgggagaagacgccattgcgagcggacgggtcatgcag
cagattgcggccaggtacgtgtcaaagattcccgaagacctcgaggagattcaccgcagt
caggttgtttgggcgcaggagcaggcagaaaacttccaagaatatatgcgacggcgcaac
ccacaatttgttgctgacggagcctggcccgagcggctctag
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