Lysinibacter sp. HNR: FrondiHNR_07250
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Entry
FrondiHNR_07250 CDS
T09375
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00220
Arginine biosynthesis
lyh00240
Pyrimidine metabolism
lyh00250
Alanine, aspartate and glutamate metabolism
lyh01100
Metabolic pathways
lyh01110
Biosynthesis of secondary metabolites
lyh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FrondiHNR_07250 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FrondiHNR_07250 (carB)
00220 Arginine biosynthesis
FrondiHNR_07250 (carB)
Enzymes [BR:
lyh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
FrondiHNR_07250 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
WGD36283
LinkDB
All DBs
Position
complement(1604407..1607712)
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AA seq
1101 aa
AA seq
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MPKRTDINSVLVIGSGPIVIGQACEFDYSGTQACRVLREEGVRVVLVNSNPATIMTDPDF
ADATYIEPITSEVIESIIAKEKPDAILPTLGGQTALNAAMELHEKGILDKYDVELIGANV
DAIKRGEDRQLFKELVIAAGAGVAKSYIAHTVEECLEYAEDLGYPLVVRPSFTMGGLGSG
FVYTPEELTRVAGDGLHYSPTTEVLLEESILGWKEYELELMRDKADNTVVVCSIENVDPV
GVHTGDSITVAPALTLTDREFQKMRDIGIDIIRSVGVDTGGCNVQFAVDPADGRIIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAIGYRLDEIPNDITRVTPASFEPTLDYVVVKVPR
FAFEKFPAADATLTTTMKSVGEVMAIGRNYSTALQKALRSLEKKGSSFHWGEENRGVAEL
LELITVPTDGRLVLVQQALRKGATLEQVFEATKIDPWFIDQIILINEVADLIARAPELTR
EVLKHAKEHGFSDVQIAELRNLGMGGSVHESDVRAIRHNFGLRPVYKTVDTCAGEFPALT
PYHYSSYEQETEVEASSGRKVVILGSGPNRIGQGVEFDYSCVHASFALSAAGFETIMINC
NPETVSTDYDTSDRLYFEPLTLEDVLEIIHAESASGELVGVVVQLGGQTALGLAKGLKAA
GIPILGTTPEAIDLAEERGLFSNILEDSGLLAPRNGIAYDFPGAQRVAQEIGYPVLVRPS
YVLGGRGMEIIYDPVSLEDYFERIKDQGIISPSSPLLVDHFLDDAIEIDVDALFDGKQLY
VGGVMEHIEEAGVHSGDSSCTLPPVTLGYDQINKVREATLAIAQGIGVRGLLNVQFAIGQ
GILYVLEANPRASRTVPFVSKALGIPLAKAASRIMVGESISTLIAEGILPERDGSRAPLD
APVSVKEAVLPFKRFRTHEGLIVDSLLGPEMRSTGEVMGIDRDFPRAFAKSQTAAHGGLP
LSGRVFVSVADRDKRSVVLPALRLQELGFELLATQGTAVVLARNGIQSRTVKKFSQAGDQ
PSIVDLINNGEVDMVVNTPSGRSARSDGYEIRAAAVAADKPLFTTIAELTAAVASFSAAK
DGFEVTSLQEYAAMREAVIAQ
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgtaccgatattaactccgttcttgtgattggctccggtcccatcgtgatc
ggtcaggcctgcgaatttgactactctggcacccaggcctgccgtgtccttcgtgaggag
ggggtccgggtcgtcctggtgaactctaatccggcaacgattatgaccgatccagacttt
gccgacgccacctatattgagcccatcacctccgaggtgattgagagcatcatcgccaag
gaaaaacctgatgccatactgcccaccctcggcggccagaccgcactcaacgcggccatg
gaactgcatgagaagggcattcttgataagtacgatgtggaacttatcggggctaacgtt
gatgccataaaacggggtgaggaccggcagctctttaaagaattagtgatcgcggccggt
gctggggtagcaaaatcatacatcgctcacaccgtcgaggaatgcctggaatacgccgag
gacctgggatatcccctggttgtgcggccctccttcaccatgggtggcctgggatcgggg
tttgtgtataccccggaggaactcaccagggttgccggtgatgggctgcactacagtccc
accacggaggttcttctcgaggaatctatcctcggttggaaagagtacgaacttgagctg
atgcgcgataaagcggataacactgttgtggtgtgctcgattgaaaacgttgatcccgtt
ggggttcacacgggagactcgatcaccgtggctccggcgctcaccctgaccgatcgcgag
tttcaaaagatgcgcgatattggcatcgatattattcgctccgtcggggtcgataccggt
gggtgcaacgtgcagtttgccgtggatcccgctgacggacgcatcatcgttattgagatg
aacccgagggtgtccaggtcatccgccctcgcctcgaaggccaccggcttcccgatcgct
aagatcgcggcaaagctcgcaatcggttaccggctggacgagatcccgaacgatatcacc
cgggtcacgccggccagctttgagccgaccctcgactacgttgttgtgaaggttccccgt
tttgcgtttgagaagtttcccgcggcggacgccaccctcaccaccactatgaagtcggtg
ggagaggtgatggcgattggccgtaactactcgaccgcgttgcaaaaagcgttgcgttcg
ctcgagaagaaggggtcgtcattccactggggtgaggaaaaccgtggtgtcgccgagttg
cttgaactgattacagtccccaccgacggtcgtttagttctggtgcagcaggccctgcgc
aaaggggcaaccctggaacaggtgtttgaggcaaccaaaattgatccctggtttatcgac
cagattatccttatcaatgaggtggcagacctcatcgctcgggcaccggagcttacccgt
gaggtccttaaacacgccaaagagcacggcttctcggatgttcaaattgcggagctcagg
aatttgggtatggggggaagcgttcacgagagtgatgttcgtgctatccgtcataacttc
ggactgcgccccgtctataaaacggttgatacctgtgcgggtgagttccccgcgctcacc
ccctaccactactccagctatgaacaagagacggaggttgaggcaagctcggggcgtaag
gtggtgattctgggatccggccctaaccgaattggtcagggggtggagtttgactactcg
tgtgttcacgcttcattcgctctctccgctgccggctttgaaaccatcatgatcaattgc
aaccccgagaccgtatccacagactacgatacgtcagaccgcctctactttgagcctctc
actctggaagacgtcctagagattattcacgccgagagcgcgagtggcgaattggtaggg
gtggtcgttcaactgggcggacagactgcgctagggttggccaagggattaaaggctgcg
gggattcccattctgggaaccactcccgaggcgatagatctggccgaggagcgtgggctc
ttctcaaacattcttgaggactcggggctgctcgctccacgcaacggcatagcgtatgat
ttcccgggtgcgcagcgggttgcccaggagatcggatatcccgtgcttgtccgtccctct
tacgttttgggtggccgcggaatggagattatttatgatccggtctcgcttgaagactac
tttgagcggatcaaggatcagggaatcattagtccgagcagccccctactggtggatcac
tttctcgatgacgccatagagattgatgtggatgcgctctttgacggcaagcaactctac
gttggtggtgtgatggagcacatcgaagaggcgggagttcactcgggagactcaagctgc
acgcttcctcctgtcaccctcggatacgaccagattaataaggttcgtgaggccactctt
gccattgcgcagggcatcggggtccgtggactgctgaacgtgcagtttgcgattggacag
ggcatcctctacgtgctggaggctaatccacgggcaagccgtacggtaccgtttgtctcg
aaggcgctgggtattcccctggcaaaagctgcctcgcgaatcatggtgggggagagcatt
agcacgcttatcgcggaggggatactgccggagcgtgatggctcacgtgcgccgcttgat
gcgccggtatcggttaaagaggccgtgctgccttttaaacgtttccgtacacacgagggt
cttatcgttgactcgctgctgggaccagagatgcgctccacgggagaggtcatgggcatc
gatcgtgatttcccccgtgcctttgcgaagagccaaacggccgctcacggaggtttgcct
ctttccggcagggtttttgtgtcggttgcggatcgggacaaacgctcggtcgttttgccc
gccctgcgccttcaggagcttggttttgagttgcttgcaacccagggaacggcggtggta
cttgcgcgtaacggcattcagagtcgtactgttaagaagttttcgcaggcgggagaccag
cccagcattgttgacctgattaataacggtgaggtcgatatggtggtgaacacccccagc
ggtcgcagcgctcgctccgatgggtatgagattcgcgcggcggctgttgccgctgataag
ccactgttcaccacaattgcagagcttacggcggcggtcgcctcatttagcgcggctaag
gacgggtttgaagtgacctctctgcaagagtatgcggcgatgcgtgaggcggtgatagct
cagtga
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