Lysinibacter sp. HNR: FrondiHNR_07550
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Entry
FrondiHNR_07550 CDS
T09375
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lyh
Lysinibacter sp. HNR
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyh03032
]
FrondiHNR_07550
03400 DNA repair and recombination proteins [BR:
lyh03400
]
FrondiHNR_07550
Enzymes [BR:
lyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FrondiHNR_07550
DNA replication proteins [BR:
lyh03032
]
Prokaryotic type
DNA Topoisomerases
FrondiHNR_07550
DNA repair and recombination proteins [BR:
lyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FrondiHNR_07550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
WGD38628
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Position
1670180..1672609
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AA seq
809 aa
AA seq
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MQSSFLEYAYSVIYSRALPDARDGLKPVQRRILYQMTEMGLRPDKGHVKSSRVVGDVMGR
LHPHGDASIYDALVRLAQDFTLRLPLIDGHGNFGSLDDGPAAPRYTEARLAGAALAMTDN
LEEDVVELVPNYDNQLTQPEVLPAAIPNLLVNGASGIAVGMATNMAPHNLVEIVQGAQHL
LMNPQATVEELMEFIPGPDLPGGGTIVGLDGVKDAYRSGRGAFRTRATAKVEALTPRKNG
LIITELPYLVGPERIIEKIKEGVEAKKLSGITDVIDLTDMKNGLRLVISVKAGFDPEAVL
EQLYRYTPLEDSFSINNVALVEGQPQTLGLKELLTVFIEHRISVITRRTRYRLARRRERL
HLVDGLLVAILDIDEVIQLIRSSNDSEGARQRLMEVFDLSQIQAEYILELRLRRLTKFSR
IELEAERDDLLAQIAELEKILGSKRRIREVVSEELDVVAEKFGTPRRTLLRGAAPARVSS
AQAKKANLELVDTPCTVLLSVTGRVLRIDDAQESPAGTLKKAPRRLKHDAVLSAIRTTSR
SEVGAVTTAGRLIRFTPMDVPTVPGASIQFAAGVPLSDYLGVLAAHERVLLITPLTDETV
LALGTKQGVVKRVGLNDLPVKPEYDMISLKEGDSVVGATITEDNDDLVFVTSDAQLLRFS
AQTVRPQGRQAGGMAGIKLGASANVIFFTSVPAASTESAIVVTVADSSTTLPGTAIGSGK
VSEFSSYPSKGRATGGVRTQRFLKGEDQLTAAWVGSGEPRALGADYSPRTLPTDMTRRDA
SGSFVDGEVSFIGTSVRTALGDTDEPQES
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcatttctggaatacgcctactcggtcatttattcacgcgcgctgcccgac
gctcgggacggcctcaaacccgtacagcgccgaattctgtatcaaatgacagagatgggt
ctgcggcccgacaaaggacacgttaagtcatcccgtgttgttggcgatgtcatgggaaga
ctgcacccccacggtgatgcctccatctatgatgctctggtgcgtctcgcacaggatttc
accctgcgtctccccctcatcgacggacacggtaattttggctctcttgacgatggcccc
gctgccccccgctacaccgaggcccgcctcgcgggcgccgctcttgccatgacggataat
ctggaagaagacgttgttgagctcgtgcccaattacgataatcagctcacgcaacccgag
gttcttcccgcagccataccaaatctgcttgttaacggagcatcaggcatcgccgtggga
atggcaacaaatatggcgccccacaaccttgtggaaattgttcagggcgcccagcacctg
ctcatgaatccacaggcaacggttgaggagctaatggagtttattccaggaccggacctt
cccggcggcggtacaatcgttggcctcgacggggtcaaagatgcctaccgtagcggtcgt
ggcgcgtttcgtacacgcgcaacggccaaggtcgaagctctgactccccgcaaaaatggg
cttatcatcactgagttgccctatctggttggccccgaacgtatcattgagaagatcaaa
gagggtgttgaggccaagaaactcagtggaattacagatgtcattgaccttaccgatatg
aagaacggtctacgcctggttatcagtgtcaaagccgggtttgatcccgaggcagttctt
gagcaactctaccgctacaccccgctcgaagattcgttcagcattaacaacgttgcactt
gtcgagggacagccccaaaccctgggcctgaaagaactcctcaccgtttttattgagcat
cgtatttcggttattaccaggagaacccgttatcgtctggctagacgcagggaacgcctg
cacctggttgacggactccttgttgccattctcgatatcgacgaggtcattcagcttatc
cgctctagtaatgactccgaaggcgcgcgccagcgcctcatggaagtctttgacctgagc
cagattcaggccgaatatattcttgagcttcggctacgtcgcctcaccaagttttcgcgt
atcgaacttgaggcagaacgcgacgatctactcgctcaaatcgctgagctcgaaaagatc
ctggggagtaagcggcgcattcgcgaggtcgtctccgaagagctcgacgtggttgccgaa
aagtttggcacccccaggcgcacgctcctcaggggagcggcacccgcacgcgtctcatca
gcacaagcaaaaaaagctaatcttgagcttgttgacaccccgtgcaccgtcttgctctca
gtaacggggcgagtgcttcgaattgatgacgcccaagagagccccgcgggaacactaaaa
aaagctcctcgacgcctcaaacacgatgccgtgctctcggctattcgcaccacctcccgc
tcggaggtaggtgccgtaacaacggccgggcggctcatacgctttaccccgatggatgtt
cccacggtacccggggccagcattcagtttgccgcgggggttccgctctcagactacctc
ggtgtgcttgccgcccacgaacgggtactcctgattaccccgctcaccgatgagacggtt
ctagcactcggcacgaagcagggagtcgttaagcgggtaggcctcaacgacctccctgta
aaacccgaatacgacatgattagcctgaaagagggcgatagcgtagttggagccaccatt
acagaggataacgacgacctggtctttgtaacctcagacgcccaattgcttcgttttagc
gcacaaaccgttaggcctcaaggcaggcaggcaggcggaatggccggtataaagctgggg
gcctcagccaacgtcatcttctttacttctgtgcccgctgcatccacagaaagcgccatc
gtcgtgaccgtcgctgatagctccacgacgcttcccggtactgctatcggcagcggtaag
gtgagcgaattctcaagctatcccagtaagggacgtgctaccggaggtgtacgtacccag
cgcttcctcaagggggaagaccaactcaccgccgcctgggtgggtagcggtgagccccgc
gcgctcggcgctgactactcgccacgcacccttccaacagacatgacccggcgagacgcc
tccggcagttttgtcgatggcgaagtctcctttatcggaacgtctgtgcgcacagcgcta
ggtgacactgatgaaccgcaggagtcatag
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