Lysinibacter sp. HNR: FrondiHNR_07785
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Entry
FrondiHNR_07785 CDS
T09375
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh03420
Nucleotide excision repair
lyh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FrondiHNR_07785
03430 Mismatch repair
FrondiHNR_07785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyh03400
]
FrondiHNR_07785
Enzymes [BR:
lyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FrondiHNR_07785
DNA repair and recombination proteins [BR:
lyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FrondiHNR_07785
MMR (mismatch excision repair)
Other MMR factors
FrondiHNR_07785
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WGD36380
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Position
complement(1723173..1724858)
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AA seq
561 aa
AA seq
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MTDIPVLLQGLDEEQRRAAMALRGPLVILAGAGTGKTRTITHRIAYGVASGAYSAQRVMA
LTFTDRAAGELRVRLRQLGASGVSARTFHSAALSQLSFFWPQVVGGTAPSLLTGKGRNLG
QAAEQLHLPVDAESLRDVASEIEWRKVNMLSPAQYERALVTRAKPSGLSQQQLLELMDCY
ERLKDERRQIDFEDVLMLTLGMFENEPRVALQVREQYRHFVVDEYQDVSPLQHALLSAWV
GDRRDLCVVGDASQTIYSFAGASSEYLLQFGVTYPDSTVVRLEQNYRSQAPIVSTANSLM
KNQRGALRLRPATEQQQGGAVPTVSVAADDQSEAENVANAIAVQIESGVSARDIAVLFRL
NVQSFLLETALARRGISYQVRGAGRFFERTVVKQAVHAIRAAALVAVSEPLFQTVSDVLR
SLGWTQEPPTEAGAVRERWDALSALMALVDEAPQNTTLRAFSDDLLERQNTQHEPVLDAV
TLATIHTAKGLEWEYVYVPGVSEGLLPISYAETPEAVEEERRLLYVAITRARTGLALSWA
KRGARDRSRSPSRFLSDLNLE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatattccagtgttattgcaggggcttgatgaagagcagcgccgtgccgcgatg
gctttgcgtggcccgctggttatcttggcgggtgcgggcacgggtaagacccgtacgatt
actcaccgcatcgcctacggcgttgcgagtggagcctattcggcgcaacgtgtgatggcg
ctcacctttaccgatcgggctgcaggtgagcttcgtgtccgtctgcgacaattgggtgcc
agcggggtgtccgcacgaacgtttcactcggcggccctctcccagctcagttttttttgg
ccccaggtcgtcggcgggactgctccgagcctactcacgggtaaggggagaaatctcggg
caggctgcagagcaattgcaccttccggttgacgccgagtctttgcgagatgtggcgtcg
gagattgagtggcgcaaggttaatatgctctcgcccgctcaatatgagcgagccctagtc
actcgggcaaagccgagtggactgagccaacagcaacttctcgagctcatggactgctac
gagcgactcaaggatgagcgacgtcagatcgattttgaagacgtcctgatgcttaccctg
ggcatgttcgagaacgaacctcgggttgctttgcaagtgagggaacagtaccgtcatttt
gttgtggatgagtatcaggatgtctcgcccctgcaacacgctctgctctcggcttgggta
ggtgatcgccgtgacctctgtgtggtgggtgatgcgagtcaaaccatctactcgtttgca
ggtgcgtcaagtgaatacctgcttcagttcggtgtgacctatcctgactctaccgtggtt
aggctcgagcaaaactaccgttcacaggctcctatcgtttctacggcaaactctctgatg
aaaaaccagaggggcgctctgcgcttgagacccgcaacggagcaacagcaggggggagcg
gtacccacggtgagcgttgcggcggatgaccaatccgaagcggagaacgtggctaatgcg
attgcggtgcaaatagagagcggtgtttctgctcgtgatatcgcggttttgtttcggctt
aatgttcagtcttttctcttggaaaccgccctcgcacgcagggggatcagctatcaggtt
cggggtgctgggcggttttttgagcggacggttgttaaacaggccgttcacgctatcagg
gcggccgcgcttgtagctgtgagcgaacccctgtttcagacggttagtgatgtgcttcgt
tcgctggggtggacgcaggagccgccgactgaagcgggggcagtgcgtgagcgctgggac
gctctgagcgctctgatggccctggtggatgaggcaccccagaacaccacactgcgagct
tttagcgatgaccttctagagcgtcaaaacacgcagcacgaaccagtgttagacgctgta
accctggctacaatccatacggctaaggggttggagtgggagtacgtttatgtgccgggt
gtgagtgaagggttgctccctatttcgtatgcggaaaccccggaggcggtggaggaggag
cggcgactcctctacgttgctatcacacgagcccgcaccgggcttgctctgtcctgggca
aagcgtggcgctcgtgatcgatctaggagcccgtcacggtttttgagtgatctgaattta
gaatag
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