Lysinibacter sp. HNR: FrondiHNR_07935
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Entry
FrondiHNR_07935 CDS
T09375
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00900
Terpenoid backbone biosynthesis
lyh01100
Metabolic pathways
lyh01110
Biosynthesis of secondary metabolites
Module
lyh_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
FrondiHNR_07935
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lyh01006
]
FrondiHNR_07935
Enzymes [BR:
lyh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
FrondiHNR_07935
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
FrondiHNR_07935
2.5.1.29 geranylgeranyl diphosphate synthase
FrondiHNR_07935
Prenyltransferases [BR:
lyh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
FrondiHNR_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
MbtH
Motif
Other DBs
NCBI-ProteinID:
WGD36408
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All DBs
Position
1757813..1758940
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AA seq
375 aa
AA seq
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MKAAATDNLAREKLRGTIKHELAEIFARQSAAAQAYGSEFSKLWSIATQHVLGGKLVRPV
LMMETYDALVEDNPSQQATDRSTVLRIATAIEILHYSFLLHDDVIDGDLFRRGRRNLIGT
LLDDGVNRLYGEVSQKGREDTALHWARTGGILMGDLLLAATHQLFARAEVPQKMRLKLLD
LLEHSITESVAGEQLDVGLSDGLIMPDLSTVLAMSTHKTATYTFELPLRTAAIIAGTTQE
LENSLAMAGRYLGLAFQLQDDLISTFGDSEVHGKDAFSDLRERKQTTIISYARTTSTWPS
IEANFENPKITVEVAERIRSLLDECGAKKFVRSLIEEQTSALYEVLVNAHSAHSIPPGAR
RLLLSYASELKGRAA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgctgccaccgataatctggcccgtgagaaactacgtggaacgattaaacat
gagctcgcggaaatcttcgcccggcagagcgctgcagcacaggcgtatgggagtgaattc
tcgaagctttggtcaattgccacacaacacgtactgggcggaaagctagtccgcccagta
ctgatgatggagacatatgacgcactggtggaggacaacccttctcagcaagctaccgat
cgttcgacagtactacgcatcgctaccgcaatcgaaatactgcactactcgtttctcctg
catgatgatgtgattgacggggatctcttccgacgtggtcgccgcaaccttatcggaacg
ctcctagacgacggtgttaaccgtctctatggcgaggtctctcagaaaggaagagaggat
accgcgcttcactgggctcgtaccggtggaatcctgatgggtgatctgctattagcggcc
actcaccagttgttcgccagggcggaagtgccgcaaaaaatgcgtctaaaactgctggat
ctgcttgaacacagcattactgagtcggtggcgggtgagcagttagatgtcgggctcagc
gacgggctaatcatgcccgacctcagcacggtgctcgcaatgtccacacataaaactgca
acctacacgtttgagttacctctgcgaacagccgcgatcatcgccggcactacccaagag
cttgagaacagccttgcgatggcgggtcgttatctcggactcgccttccagctccaagat
gacctaatctccacgtttggcgactccgaggttcacgggaaggacgcattctctgatctt
cgtgagagaaaacagacaaccatcatctcgtatgccaggacgaccagcacatggccctca
atcgaagccaattttgagaatccaaagatcaccgtggaagttgccgagcgaatacgaagt
ctactcgacgagtgcggggcaaagaaatttgtgcggagcctaatcgaagaacagacctca
gccctgtacgaagtgttggtaaatgcgcatagtgcgcactctattcctccaggagcgcga
cgcctcctcctttcatatgcctctgagcttaaggggcgtgcagcatga
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