Lysinibacter sp. HNR: FrondiHNR_08305
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Entry
FrondiHNR_08305 CDS
T09375
Name
(GenBank) polyprenyl synthetase family protein
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00900
Terpenoid backbone biosynthesis
lyh01100
Metabolic pathways
lyh01110
Biosynthesis of secondary metabolites
Module
lyh_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
FrondiHNR_08305
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
FrondiHNR_08305
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lyh01006
]
FrondiHNR_08305
Enzymes [BR:
lyh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
FrondiHNR_08305
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
FrondiHNR_08305
2.5.1.29 geranylgeranyl diphosphate synthase
FrondiHNR_08305
Prenyltransferases [BR:
lyh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
FrondiHNR_08305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WGD36479
LinkDB
All DBs
Position
1843974..1845140
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AA seq
388 aa
AA seq
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MSHSARLLSQLQGCLDDFLNTRSSILTDISPDAAPLLERSQNFLSGGKRFRALFTYWAWR
GLVENRESDPFVSTPQGEALNDPDSLEASPQASRDHSTVIRVASALELFHAAALVHDDVI
DNSDTRRGALAAHKQFEHAHLNGEWRGSAAAFGVAGAILLGDLLQFWSDELFNDGTSALA
DQVSARAARAHFNRMRSEVAAGQYLDVLEEQVWGNASDAEQLERSTRVLIYKSAKYTVEA
PLLIGAALAGATPEQEALLSDFGLPLGIAYQLRDDVLGVFGDSSITGKPSGDDLREGKQT
VLIALTRRALPGNQRRLFDELVGDPTLDSAQITLLQNTITDTGALAQVEKMITENVQRSQ
SALDDAPVGPVTRHQLRTLANRVANRVA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacacagcgccagacttctcagccaattacagggttgtcttgatgacttcctcaac
acccgctcctctattctgaccgatatcagtccagacgccgcccccctcctagaacgatca
caaaacttcctcagcggcggcaaacgattccgcgcccttttcacctactgggcctggcgc
ggccttgttgagaaccgcgagtccgatccttttgtgagcacaccgcagggagaagcacta
aacgatcccgactccctggaggcttcacctcaggcctcccgagaccactcaacagttatt
cgggtggcaagcgcactggaactttttcacgcggcagcgcttgtccacgacgatgtcatc
gacaactcagacacgcgccgcggcgccctcgccgcacacaagcagtttgaacacgcccat
ctcaacggcgaatggcgcggcagcgcggcagcgtttggtgtggccggagcgatcctcctc
ggtgacctacttcagttctggagcgatgagctttttaacgatggaacgtcggctctcgca
gaccaggtatccgcccgagccgcacgtgcgcacttcaaccggatgcgatccgaggttgcc
gcgggtcagtacctcgatgtgctcgaagagcaggtctggggaaacgcctccgacgcggag
cagctcgaacgctccacccgtgtcctcatctacaagtcagcaaaatacaccgtggaagcc
cccctcctcataggtgccgccctcgccggagcaaccccggaacaggaagctctcctcagc
gattttggtcttcccctgggcatcgcctaccagctacgcgacgatgtgctcggagttttt
ggtgattcctcaatcacgggaaaaccctccggcgacgatctccgagagggtaaacaaacg
gttctcattgcgctcacgcggcgcgcgctccccggtaatcagcgtcgactctttgacgaa
cttgtgggtgaccccactctggacagcgcacagatcaccctgttacaaaacaccatcacc
gatacgggtgccctggcgcaggtggaaaaaatgatcacagagaatgtgcagcgctctcag
agtgccctcgacgatgcccccgtcggaccggtaacccgccatcaattacgaacccttgct
aacagagttgccaatcgggtcgcctag
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