Lysinibacter sp. HNR: FrondiHNR_08340
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Entry
FrondiHNR_08340 CDS
T09375
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00020
Citrate cycle (TCA cycle)
lyh00620
Pyruvate metabolism
lyh00720
Other carbon fixation pathways
lyh01100
Metabolic pathways
lyh01120
Microbial metabolism in diverse environments
lyh01200
Carbon metabolism
lyh01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FrondiHNR_08340
00620 Pyruvate metabolism
FrondiHNR_08340
09102 Energy metabolism
00720 Other carbon fixation pathways
FrondiHNR_08340
Enzymes [BR:
lyh01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
FrondiHNR_08340
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GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
Dala_Dala_lig_C
ATP-grasp
BSH_RND
RnfC_N
BSH_CusB
BSH_YhbJ
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
WGD38636
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Position
complement(1852621..1856019)
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AA seq
1132 aa
AA seq
DB search
MFTKILVANRGEIAIRAFRAAYELGAQTVAVFPYEDRNSLHRLKADEAYQIGEPGHPVRA
YLSVSEIIRVAQESGADAIYPGYGFLSENPELAAAAAAVGITFVGPSSRVLEMAGNKVTA
KEHAIAAGVPVLKSTPPTQDIDELITGADEIGFPVFAKAVAGGGGRGMRRVERREDLRAA
LEAAMREAESAFGDATMFVEQAVLRPRHIEVQILADKNGETVHLFERDCSVQRRHQKVVE
IAPAPNLDEETRRALYRDAVAFARSIGYENAGTVEFLVDTAGERAGEHVFIEMNPRIQVE
HTVTEEVTDVDLVQAQVQIAAGASLSQMGLEQNNIHLRGAALQCRITTEDPSQGFRPDTG
KITTYRSPGGGGVRLDGGTINPGAQISPHFDSMLAKLTCRGRDFSAAVTRAQRALAEFRI
RGVATNIPFLQAVLEDSQFRLGDVSTSFIEERPELLDTHRSKDRGTKVLSWLADVTVNQP
HGPRPSRTNPSEKLPARGLHLEIPRGTRDHLLAVGPAKFAADLRAQTRLAVTETTFRDAH
QSLLATRVRTKDLLAVAPYVSRLTPELLSVEAWGGATYDVALRFLGEDPWNRLAQLREAM
PNIPIQMLLRGRNTVGYTPYPTEVTDAFVREAADTGVDIFRIFDALNDVDQMRPAIDAVL
NTGTSVAEVAVCYTGNLLDPAEDLYTLDYYLRLAEQIVESGAHVLAIKDMAGLLRPEAAA
RLVRAFRERFDVPVHLHTHDTAGGQLATLLAAANAGVDAVDAASAPMAGTTSQPSLSSLV
AALADTERDTGINLDNVLDLEPYWDAVRHIYRPFESGLPGPTGRVYQHEIPGGQLSNLRQ
QAIALGLADDFELIEDMYREADRILGRVPKVTPSSKVVGDLALHLAAVRADPKDFEENPQ
NYDIPDSVVRFMAGELGDLPGGWPEPFRSKVLAGREVKTGITRVAPEDLALLVADSENRR
KTLNRLLFPAPTAHYEATRDEYGDLSVLETSGYLYGLVPGEEHAVDIAKGVRLYLGLEAI
GEADDRGIRTVMAIMNGQLRPVFVRDRSIAVDTIATEKADRDNPAHIAAPFSGAVTIKVA
VGDRVESGQPVASIEAMKMEAAITASTGGAVERLAFSGTRQVEAGDLLCVIR
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaagattcttgttgcaaatcgaggagagattgcaatacgggcgtttcgtgcc
gcgtacgagttgggggctcaaacggttgcggtttttccctacgaggatagaaactcactt
catcgattgaaggccgatgaggcctaccaaattggcgagcccgggcatccggttcgcgcc
tatttgagtgtctcagaaattattcgtgtggcacaggagtctggtgcggatgctatctat
ccggggtatggctttctctctgagaaccccgagttggccgctgctgctgccgctgtgggt
atcacctttgttggtccatcctctcgggtgcttgaaatggcgggcaataaggtcacggct
aaggagcacgcaattgctgcgggtgttcccgttctcaaatcaaccccgccgacgcaggac
atcgatgagcttattacgggtgccgatgagataggttttcctgtttttgctaaggctgtt
gccgggggtggtggccgggggatgcgccgtgtcgaaaggagagaagacctacgcgccgca
ctcgaggccgctatgcgcgaggctgaaagcgcttttggtgacgccaccatgtttgtagag
caggctgttttgcgtccgcgccacattgaggtgcagattcttgcggacaagaacggcgag
actgttcacctttttgagcgtgactgttcggtgcagaggcgtcaccagaaggtggttgag
attgcgcccgccccgaacctggacgaggagactcgacgggctctctatcgggatgctgtt
gcgtttgctcggtctattggatacgaaaacgctggaaccgttgagttccttgtggatacg
gcgggggaacgcgccggggagcatgtgtttatcgagatgaaccctcgtattcaggttgaa
cacaccgttactgaagaggtcaccgatgttgatctggtgcaggctcaggtgcagattgct
gccggggcttccctgtcccagatggggttggaacaaaacaatattcacctgcgtggagcg
gcactgcagtgccggattacgacggaggatccctcacaggggttccggccagataccgga
aaaatcacaacttatcgttcccccggcggtgggggcgttcgtcttgacggtggaactatt
aatcctggggcgcagatcagccctcactttgattcaatgctggcaaagctcacctgccgg
ggtcgagatttttcggccgctgtgacccgggctcagagagcgttggcagagtttcgtatc
cggggtgttgccaccaatattccgttcctgcaggcagttctggaagattcccaatttcgt
ctcggggatgtgagcacaagcttcatcgaggagaggcccgaactgctcgatacgcatcgc
tccaaagatcggggaacaaaggttctgagctggcttgccgatgtcacggtgaatcaacct
cacggtcctcgtccttctcggacaaacccctccgagaagctgccggctcgtgggcttcac
ttagagattcctcgcggtacacgagaccatcttctcgcggttggccccgcaaaatttgcg
gctgatctgagagcacaaacgaggctggcagttacggaaacaaccttccgcgacgcacac
cagtccctgcttgctacccgcgtgcgtaccaaggatttgcttgctgtggcgccctatgtg
tctcgtctcacccccgagcttctttctgttgaagcgtggggtggagccacctacgatgtc
gccctgagatttcttggagaagacccgtggaaccgccttgcacagcttcgcgaggcgatg
ccgaacattccaatccagatgctgctgcgcgggcgtaacacggttggctatacgccctac
cccacagaggtgacggatgcgtttgtgcgcgaggctgcagacacgggggttgacattttc
cgcatatttgatgccctcaacgacgttgatcagatgagaccggccatagatgccgtgctt
aacacaggaacctctgtggctgaggtggcggtctgttacaccggtaatctgctcgacccg
gccgaagatctctacacgctcgattactatctgcgcctggcggaacagatagtggagagc
ggggcacatgttcttgcgatcaaggacatggccggactattgcgcccagaggccgcagcc
cggcttgtgagggcttttcgggagcgctttgacgttcctgttcacctgcacacgcacgac
acggcaggagggcaattagctacgcttctcgccgcggcaaatgcgggggttgacgcagtg
gatgcagcaagcgcgccgatggccggtactacgagtcagccctcgctctcctcgcttgtt
gcagccctggcggataccgagcgagacaccggcatcaatctggataatgttcttgatctt
gaaccctattgggatgccgtgcgtcacatctatcggccttttgaatccgggttgcccggc
cctaccggtcgggtctatcagcatgagattccgggtggtcagctctccaacctccgccag
caggccatagcattggggctggctgacgatttcgaattgatagaggatatgtacagggag
gccgataggattctcgggcgtgttcccaaggtcacaccgtcttccaaggtggtgggtgac
ctggctcttcacctggctgcggttcgtgctgatccaaaagatttcgaggagaatcctcaa
aactacgatattcccgactctgtcgtaaggtttatggcgggtgagctcggagatcttccg
ggcggatggcctgagccgtttcgcagcaaggttcttgccggtcgcgaggtaaagacgggt
atcacgcgggttgcaccggaagacctggcgcttctcgtagctgacagcgaaaatcgcaga
aagaccctcaatcgacttctcttccccgcgccaactgctcactacgaggcaacgcgtgat
gagtacggcgatctctccgtgctggagaccagcgggtatctctacgggcttgtgccgggt
gaggaacacgccgttgacatcgcaaagggggtgcggctttacctggggctcgaggccatc
ggtgaggcagacgacaggggcatccgtaccgttatggcaatcatgaacggtcaactgcgg
cccgtgttcgtgcgggacaggagcattgcggtggacactattgccactgaaaaggcagat
cgggacaatcctgctcacattgctgctccgttctcaggggcggtaaccattaaggtcgct
gtgggggatcgggttgagagcgggcagcccgtggccagtattgaggcgatgaaaatggag
gcggcgattactgcctccacgggcggtgctgttgagcgcctggcttttagcggtactcgt
caggtagaagctggggatcttctctgcgttatcaggtag
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