Lysinibacter sp. HNR: FrondiHNR_08650
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Entry
FrondiHNR_08650 CDS
T09375
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FrondiHNR_08650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyh03400
]
FrondiHNR_08650
Enzymes [BR:
lyh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FrondiHNR_08650
DNA repair and recombination proteins [BR:
lyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FrondiHNR_08650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
WGD36540
LinkDB
All DBs
Position
1923731..1924567
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AA seq
278 aa
AA seq
DB search
MKIERFMQKLHSEKISPTSGIRLNAAQPFHHNTAFAVLQAHAIPGAERTDHDILTHTRVF
RTANGPSVVTIAFDTEGVRVHLDTRDQATTEILQRVQAWLGLNTDTTQIDQALSRDTLLA
PLVTQRPGIRLIGYPEEFEAVATTVIGQQVSLAAVLAQQDVNELQQCTGLTRARTKTLHT
VATHWADGDLLTGLAPEEARRMLLAIPGIGPWTTDYLLVRALQHPDTFALGDLVARRALG
LNHREAERRSHDWAPYRSYALLHLWAEAAYFPAPRDTP
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgaacgattcatgcaaaagctacactctgaaaaaatatctcccacgagcggt
atccgcctcaatgccgcccaaccattccaccacaacacagcctttgcagtgctccaggca
cacgccattcccggagcggaacgcaccgatcatgatatcttgacgcacaccagggtcttc
cgcaccgcaaacgggccatcagtcgtaacaatcgccttcgatactgagggagtgcgtgtc
cacctagatacccgtgatcaggcgaccactgagatactacaaagagtacaagcctggctc
ggcctcaataccgacaccacacagattgaccaggccctcagcagggacacccttctcgca
ccgcttgtgactcaacgcccgggaatacgcctcatcggttatcctgaagagtttgaggcg
gtggccacaacagtcatcggtcagcaagtttccctcgccgccgtgctcgctcaacaggat
gtcaacgaacttcagcagtgcacgggactcacccgggcacgcacaaaaacgctccacacc
gttgcgacacactgggcagacggcgatctactcacggggcttgcaccggaagaagcccgc
cggatgctcctcgctattcccggcattgggccgtggacgacagactatctcctcgtacgc
gccctgcagcaccccgacacctttgcactcggagacctcgttgcccgccgtgcactcggc
cttaatcacagggaggctgagcggcgctcacacgattgggcgccgtatcgttcctacgcg
ctcctccacctctgggcagaggcggcgtattttccagccccgcgagacacgccctaa
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