Lysinibacter sp. HNR: FrondiHNR_08935
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Entry
FrondiHNR_08935 CDS
T09375
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
lyh
Lysinibacter sp. HNR
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lyh03009
]
FrondiHNR_08935 (der)
Ribosome biogenesis [BR:
lyh03009
]
Prokaryotic type
GTPases
FrondiHNR_08935 (der)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
Ras
RsgA_GTPase
AIG1
Roc
AAA_16
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WGD36589
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Position
complement(1986176..1987711)
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AA seq
511 aa
AA seq
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MTNDNTVPDSEGFVDPLDPDSEANERLAALDAELAEQRSEALRTGLQEYDLDDADISILA
VADEDVDTVTYLPALPVVAIVGRPNVGKSALVNRILGRREAVVEDVPGVTRDRVTYQAQW
NERKFSLVDTGGWEPGAKGIDASVAAQAEVAIDLCDVVLFIVDSRVGATATDEHVVRMLR
KTDKPVFLVANKVDNAQQELEIATLWSLGLGEPHPVSALHGRGVADLLDLVMAKLPEQSA
VAKQQVGGPRRVAILGRPNVGKSSLLNKAAGEERVVVNDLAGTTRDPVDEQVELAGKVWT
FVDTAGIRRRVHMAQGADFYASLRTSTALEKAEVAVVLIDVSQPISEQDVRIIDLVLESG
RALVLAFNKWDMLDDERRRYLEREIEQDLAHVSWAPRVNISARTGRHIEKLVPALETALE
SWDKRIPTGKINAFLAELVQAHPHPVRGGKQPRILFGTQAASRPPTFVLFTTGFLDPGYR
RYIIRRLREVYGFEGSPIVLNMRVREKRIRK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgataataccgtgcccgattcggagggctttgtagatcctcttgacccggat
agtgaagcgaatgagcgtctcgcagcgctggacgcagaattagctgagcagcgctcggaa
gcactgcgtacggggcttcaagagtatgatctggatgacgcagatatcagtattctcgcg
gtcgcagacgaggacgttgatacggtcacttacctccccgcacttcctgtggtggcgatt
gtggggcgtcccaacgtgggtaagtcggcgttggtgaaccgtatccttggccgtcgtgag
gccgttgtggaggatgtacccggggtaacccgtgatcgggttacgtatcaggcgcagtgg
aacgaacgtaagtttagcctggtggacacgggcggttgggaacccggcgcaaagggcatc
gacgcatctgttgccgcgcaggcagaggttgctatcgatctgtgtgacgtggtgctcttt
attgttgactcgagggttggggctaccgcaacggatgagcacgttgtgcggatgctacgc
aaaacggacaaacccgtttttttggtcgccaataaggtcgacaatgcgcaacaggagctt
gagattgcgacgctctggtcgcttggcctgggcgagccccatccggtgtcagctcttcac
ggacgcggagttgccgatcttcttgatctggtgatggcaaagctccctgagcaatccgca
gttgccaaacaacaggtgggcggcccgaggcgcgtagcaattctgggacgtcccaacgtg
ggtaagtcaagtcttttgaataaggccgccggtgaggagcgtgtggttgttaacgacctg
gcgggtaccactcgtgacccggtcgatgagcaggttgagctggcgggtaaggtgtggacc
tttgtggataccgctggaattcgccgccgtgtccatatggcgcagggtgcagatttctac
gcttcacttcgaaccagtacggcccttgaaaaggccgaggttgcggttgtactgattgat
gtgtcccagccgatcagcgagcaggacgtgcgtattatcgatttggttttggagtctggc
cgcgcgcttgttcttgcttttaacaagtgggacatgctggatgatgagcgtcgcaggtat
ctggaacgtgaaattgagcaggatctcgctcatgtctcgtgggctcctcgtgtgaatatt
tcggcccgcaccggccgacacatagagaagcttgtgccggcgctggaaacagccctggaa
tcgtgggataaacgcatccccacgggaaagatcaacgcttttcttgccgagcttgtacag
gcccacccacaccccgtgcgcggtggtaagcagccccgcattctttttggcacccaggcc
gcatccagaccacccacctttgtgctcttcaccacgggttttcttgatcccggttatcgt
cgatacataattcggcgcttgcgtgaggtttacggttttgagggttcacccattgtgctc
aacatgcgggtgagggagaagcgcatccgaaaatag
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