Lysinibacter sp. HNR: FrondiHNR_09525
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Entry
FrondiHNR_09525 CDS
T09375
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lyh
Lysinibacter sp. HNR
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyh03016
]
FrondiHNR_09525 (truB)
Enzymes [BR:
lyh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FrondiHNR_09525 (truB)
Transfer RNA biogenesis [BR:
lyh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FrondiHNR_09525 (truB)
Prokaryotic type
FrondiHNR_09525 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WGD36695
LinkDB
All DBs
Position
complement(2106363..2107310)
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AA seq
315 aa
AA seq
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MSLADGTVPTGILLIDKPEGMTSHDVVSRIRKKLGLKKVGHAGTLDPMATGMLVAGVGSS
TRLLTFLVGADKEYVATIRLGSTTVTDDREGETLKTAPEEAIRAITPERLSLGIRDLTGD
IKQRPSAVSAIKVAGKRAYDRVRSGESVDLPARPVTVSEFVIVDVPRPVYTDKTLTALDC
DVRVVCSSGTYIRALARDLGDALGVGGHLTALRRTRVGPFDIKDAVDLDADNLADQLRGA
ASVASHLFPTLSLSAEQTLALEQGKRVRVGQTEGAGHAWHAPIVAALAPDGRLVGLVSVT
RGETRVIVNFPVVHA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcttgctgacgggacggttcccacgggtattctgctgatcgataagcccgagggc
atgactagtcacgatgtggtgtcgcgaatccgtaagaagttgggcctcaaaaaggtgggt
cacgcggggacccttgatccgatggcaacggggatgcttgttgcgggggtgggaagttcc
acccgtctgctcacgtttttggtgggtgcggataaggaatatgtggccaccatacggttg
ggttcaacaacggtgaccgacgatcgagagggagaaactctcaaaaccgcccctgaggag
gcgattcgggctattaccccggagcggctgagtctgggtattcgtgatcttacgggggat
attaaacagcgtccgagcgcggtaagcgcgattaaggtggctggaaagagagcatacgat
cgggtgagatccggtgagagtgttgatctaccggcccggcccgtgacggtgagcgagttt
gtgattgtggacgttccgcgtccggtttacaccgacaaaacactgaccgcgctcgactgc
gatgtgcgggtggtgtgctcatcgggcacctatattcgggccctcgcgcgtgatctggga
gacgctcttggagtgggtgggcacttgaccgcgctccgacgcactcgggtgggtccgttt
gatatcaaggacgctgttgatcttgatgccgacaacctggccgatcagcttcggggggcc
gcctccgttgcctcacacctgtttcccacactctccttgagcgcggaacagaccctggcg
cttgagcagggtaaacgggtgcgtgttgggcagacagagggcgccgggcacgcctggcat
gcaccaattgttgcggcacttgcgcctgacggtcgtctggtgggtctcgtgagcgttact
cggggagaaacgcgggtgattgtgaacttcccggtggtgcacgcatga
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