Lysinibacter sp. HNR: FrondiHNR_10040
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Entry
FrondiHNR_10040 CDS
T09375
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lyh
Lysinibacter sp. HNR
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyh03400
]
FrondiHNR_10040 (radA)
DNA repair and recombination proteins [BR:
lyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FrondiHNR_10040 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
AAA_16
AAA_22
DnaB_C
DUF7125
ChlI
Lon_C
AAA
AAA_30
AAA_24
nSTAND_NTPase5
NACHT
nSTAND3
AAA_5
NTPase_1
SLFN-g3_helicase
CbiA
IstB_IS21
GvpD_P-loop
AAA_19
RecA_N
AAA_14
AAA_29
MeaB
ATPase_2
ABC_tran
DAP3
AAA_26
Zeta_toxin
AAA_18
NPHP3_N
MCM
Rad51
ArsA_ATPase
TniB
AAA_31
ParA
KTI12
Motif
Other DBs
NCBI-ProteinID:
WGD36791
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Position
complement(2209307..2210641)
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AA seq
444 aa
AA seq
DB search
MAKASSLFRCTECGWQAPKWVGRCGECQQWGTVVDSLEEPGSLGPRAVAALSADEIARPI
TQTSTVATDRSTSGIAEFDRVLGGGLVPGAAVLLSGEPGVGKSTLLLEVAATIARGGNRV
LYVSAEESVAQVRVRAERTRALTDNLFLAAETALSRVLGQCDAVQPQLLIVDSVQTIASD
SVEGIAGGPSQVREVAGTLIRLAKRQDLPVILVGHVTKDGSIAGPRLLEHLVDVVCHFEG
DRRSSLRFIRAIKNRFGPTDEVGCFEMTGGGIAEVSDPSGLFLSRSETSVSGTCVTVALE
GRRALPVEVQALVVEASAPNPRRVTSGVDSARVAMILAVLERRAGVSLGSKDVYVSTVGG
VRLTEPSADLAIALAIASAARDTPIDHSLAAFGEISLAGEVREVTAAQQRKNEAQRLGFS
TVIDAQLGSLADAQREAFRAGTPA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcttcttcattatttcgctgtaccgagtgtggctggcaggctcccaaatgg
gtggggcgctgcggagagtgtcagcagtggggaacggttgtcgactccctagaagagccg
ggttctctcggacctcgtgcggttgctgctcttagcgcagacgagatcgctcggcccatc
acccaaacatccaccgttgctacagatcgctccacaagcggtattgcggagttcgaccgt
gtgctcgggggtggtcttgtcccgggtgcggcagtgctgctttcgggcgaacccggggtg
ggtaaatccacgctgctccttgaggttgccgcaacaattgctcggggtggtaaccgggtt
ttatacgtcagtgcagaggagtccgtggcccaggtgagggtccgtgccgaacgcacccgg
gccctgacggacaacctctttttagctgctgagactgctctctccagggttctcggtcag
tgtgatgcggttcagccgcaacttcttatcgtagattccgtgcagacaatagccagcgac
tcggtcgagggcattgccggaggacccagccaggtcagagaggtggcgggtaccctgatt
cgcctggccaaaaggcaagatctccctgttattcttgtgggccatgttaccaaagacggc
agcatagctggcccccgcctgcttgagcacctggtagacgtggtgtgccattttgagggt
gatcgtcgcagctccctgcgctttattcgtgctattaaaaatcgttttggccccacagac
gaggtggggtgttttgagatgacgggtgggggtatcgcagaggtgtcggatcccagcggg
ctttttctgagtcgctccgaaacctccgtgagtggcacctgtgtcacggtggctctggag
ggtcgtcgtgcccttcctgtcgaggttcaagcgctggtggtagaggcatccgcgcccaat
ccgcgccgggttacaagcggggtcgactcggcgcgggtagccatgatcctcgcggttctc
gagcgccgcgccggagtgtcgctcggctctaaagacgtttatgtctccaccgtgggcggg
gtgaggctcactgaaccctccgccgacctggctatagcgctcgcaattgcttcggcggca
cgggacactccaattgatcacagtctggcggcttttggcgagattagccttgccggggag
gttcgagaggttaccgccgcgcaacagcgaaaaaatgaggctcagcgcctcggtttcagc
accgtgattgatgcacaactgggcagccttgctgatgctcaacgagaggcgttccgagcg
ggcacccctgcatag
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