Lysinibacter sp. HNR: FrondiHNR_10110
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Entry
FrondiHNR_10110 CDS
T09375
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lyh
Lysinibacter sp. HNR
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lyh03110
]
FrondiHNR_10110
Chaperones and folding catalysts [BR:
lyh03110
]
Heat shock proteins
HSP100
FrondiHNR_10110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
TniB
UVR
ATPase_2
nSTAND3
bpMoxR
AAA_14
AAA_18
AAA_3
IstB_IS21
TsaE
DNA_pol3_delta2
Mg_chelatase
AAA_7
NACHT
AAA_24
Zeta_toxin
AAA_19
ResIII
NBD_SMAX1
T2SSE
DUF99
GntR
Motif
Other DBs
NCBI-ProteinID:
WGD36804
LinkDB
All DBs
Position
complement(2220902..2223430)
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AA seq
842 aa
AA seq
DB search
MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR
EQVTDIIGTGQQQPTGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA
AQVLVKLGADLNRVRQTVIQLLSGYQSGKESVAVGAQETAANDKGSQILDQFGVNLTHAA
RDGKLDPVIGREKEVERVMQILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIVKGDVPETL
KDKQLYSLDLGSLIAGSRYRGDFEERLKKVTKEIRTRGDIIVFIDEIHTLVGAGAAEGAI
DAASILKPMLARGELQTIGATTLDEYRKHFEKDAALERRFQSIQVAEPSLPHTINILKGL
RDKYEAFHKVSITDGAIVAAANLSDRYISDRFLPDKAIDLIDEAGARLRLSILSSPPELR
EFDEKIAGVRTAKEAAIEDQDFEKAASLRDEEKNLLAERLRLEKKWRAGDVQTTAQVDEG
LIAEVLAQATGIPVFKLTEEESSRLVFMEKALHQRVIGQDEAISALARTIRRQRAGLKDP
KRPSGSFIFAGPTGVGKTELAKALAEFLFDDEDAMISLDMSEYGEKHTVSRLFGAPPGFV
GFEDGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVI
IMTTNLGARDIAGGPVGFQIEGNTEVGYAQMKGKVNEELKKHFKPEFLNRVDDVIVFPQL
SPAELLQIVDLFVARLRDRLLDRDMSIEVSDTAKKRLIEIGFDPTLGARPLRRAVQSEIE
DRLSERILNGQLNAGDHIKVDYVEKEFTFETISREASTAGSTIASSAAAAASTAPTTGEL
PA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagagatttaccgaccgggcgcgtcgagtggtcgttttggctcaggaagaagcc
aagatgctcaaccacaactacattggtaccgagcacattctgctcggtctcatccacgag
ggtgagggagtagccgccaaagcgctagagtcgctaggaatttccctggacgccgtgcgc
gagcaggtaaccgacattatcggtaccgggcagcagcagcccaccgggcacattcccttt
actccgcgcgcaaaaaaggtgctcgagctgagtcttcgcgaggctttgcaattggggcac
aactacattggtaccgagcacattctgctcggtcttattcgtgagggtgagggggttgca
gcgcaggttctggtgaagcttggtgccgacctcaaccgtgtccggcagaccgttattcag
cttctcagtggttaccagagcggcaaggaatccgttgccgtgggagcccaggagacggcc
gcaaacgataaaggatcgcagatccttgatcaatttggcgtgaacctcacccacgccgcg
cgtgacggaaaactcgaccccgtgatcggtcgtgaaaaagaggttgagcgcgtgatgcag
attctttcgcgccgctccaagaacaaccctgtgcttatcggcgaaccgggtgtgggtaaa
accgccgttgttgagggactcgcccaggcaatcgtgaagggtgacgtcccggagaccctc
aaggacaagcagctctactcgctcgatctagggtcgcttatcgcgggtagccgctatcgc
ggtgattttgaggagcgtctcaaaaaggtcactaaggagattcgtacgcgcggtgacatc
atcgtctttatcgatgagattcacacgctggttggtgcgggtgccgccgagggggccatc
gatgccgcaagcatcctgaagcccatgctggcccggggtgaactgcagaccatcggtgcg
accacgctcgacgaataccgcaagcatttcgagaaggacgcagccctggagcgtcgattc
caatccattcaggttgctgaaccgagcctcccgcacaccatcaatattcttaaaggtctg
cgcgataagtatgaggccttccacaaggtatcgatcacagacggtgccattgttgcggcg
gcaaacctgtccgaccgttacatcagcgatcgtttcctgccggacaaggcaatcgacctg
attgacgaggcgggtgcccggttgcggttgtcgattctttcgtctccgcccgaactgcgc
gagtttgatgaaaagatcgctggtgtgcgcaccgctaaggaagccgctattgaggatcaa
gactttgagaaggccgcctcgcttcgtgacgaggagaaaaaccttcttgcggagcgactg
cgcctcgagaaaaagtggcgcgccggagatgtccagaccaccgcgcaggttgacgagggc
ttgatcgccgaggttttggctcaggccacgggtattcccgtgttcaagctcaccgaagaa
gagtcgtcgcgactcgtcttcatggagaaggctctccaccagcgtgttatcgggcaggac
gaggctatttcggctcttgcccgcaccatccgccgtcagcgcgccgggcttaaagatccc
aagcgccccagcggctccttcatctttgccggaccaaccggtgtgggtaaaaccgagctg
gccaaggccctggcggagttcctctttgacgatgaagatgccatgatttcgctcgacatg
tcggagtacggcgagaagcacacggtatcgcgtctcttcggtgcccctccgggatttgtc
ggctttgaagatggcggacagctcaccgagaaggtgcgccgcaagccgtttagtgtggtg
ctctttgacgagattgagaaggcgcaccccgatatcttcaactcgctccttcagatcttg
gaggagggacgcctcaccgacggtcagggtcgtgtggtcgacttcaagaacaccgtgatc
atcatgaccaccaacctgggtgcccgcgatattgccggcgggccggttggtttccagatc
gagggcaacaccgaggtcggctacgcacagatgaagggcaaggtgaacgaggagctgaag
aagcacttcaagcctgagttcctcaaccgggttgacgatgtcattgtcttcccgcagctc
agtcccgcagaactgctacagatcgtggatctctttgtggcgcgcctgcgtgaccgcctg
cttgatcgagacatgtcaattgaggtgtcggataccgccaagaagcgcctgattgagatc
gggtttgatcccaccctgggcgctcgtccgctacgccgtgcggtgcagagtgagatcgaa
gatcgcctgagcgagaggattcttaacggccagttgaacgccggcgaccacatcaaggtg
gactacgttgagaaggaattcacctttgagacgatatcccgagaggcctccaccgccggg
tcaacgatcgcttcgtcggccgcggcagccgcctcaaccgcgcccaccacgggagagttg
ccagcgtag
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