Lysinibacter sp. HNR: FrondiHNR_10775
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Entry
FrondiHNR_10775 CDS
T09375
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FrondiHNR_10775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyh03400
]
FrondiHNR_10775
Enzymes [BR:
lyh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FrondiHNR_10775
DNA repair and recombination proteins [BR:
lyh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FrondiHNR_10775
Prokaryotic type
FrondiHNR_10775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WGD36923
LinkDB
All DBs
Position
complement(2353851..2354546)
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AA seq
231 aa
AA seq
DB search
MPMTLPQLADAGFITPDWAQALEPVGSQIAAMGDFLRRERAQGRDYLPAGDKILRAFSYP
LSEVKVLIVGQDPYPTPGHPIGLSFAVDRHVRPVPRSLNNIYQEMRDDLGISTPAHGDLT
EWSESGVMLLNRVLTVQPGQAASHRKKGWEAVTEHAIRVLVQRNRPLVALLWGRDAASLI
PMLGNTPVIESAHPSPLSASRGFFGSKPFSRVNAHLEALGVDPVNWALSDD
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgacgcttccccaactagcggatgccggatttattacgcccgattgggcgcag
gcgctcgaacccgttggctcacagattgctgctatgggcgattttctgcgtcgggagagg
gcgcaggggcgtgactatcttccggcgggtgacaagattttgcgggcgtttagctatccg
ctttccgaggtgaaggttctgatcgtggggcaggatccctaccccacgccgggacatccg
atcggtctttcctttgcggtggatcgtcatgtgaggccggtgccgcgcagcctcaacaac
atttatcaagaaatgcgagatgacctggggattagcacccccgctcacggcgacctcacc
gagtggagtgagtccggagtgatgctcctcaacagggttctcaccgtgcagccggggcag
gcagcctcgcatcgcaagaaggggtgggaggccgtaaccgagcacgccatccgtgttctg
gtgcagcgtaaccggccgcttgtggcgctactctgggggcgggatgcggcctctcttatc
ccgatgctgggtaacaccccagtgatcgagagtgcccacccgtcgccgttatccgcctcg
cgagggttcttcgggtccaaaccttttagtcgggttaacgcccatcttgaggcgttgggg
gtggacccggtgaactgggcgctgagtgacgattag
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