Lysinibacter sp. HNR: FrondiHNR_11180
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Entry
FrondiHNR_11180 CDS
T09375
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FrondiHNR_11180 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyh03019
]
FrondiHNR_11180 (groL)
03110 Chaperones and folding catalysts [BR:
lyh03110
]
FrondiHNR_11180 (groL)
03029 Mitochondrial biogenesis [BR:
lyh03029
]
FrondiHNR_11180 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lyh04147
]
FrondiHNR_11180 (groL)
Enzymes [BR:
lyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FrondiHNR_11180 (groL)
Messenger RNA biogenesis [BR:
lyh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FrondiHNR_11180 (groL)
Chaperones and folding catalysts [BR:
lyh03110
]
Heat shock proteins
HSP60 / Chaperonin
FrondiHNR_11180 (groL)
Mitochondrial biogenesis [BR:
lyh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FrondiHNR_11180 (groL)
Exosome [BR:
lyh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FrondiHNR_11180 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FrondiHNR_11180 (groL)
Exosomal proteins of breast cancer cells
FrondiHNR_11180 (groL)
Exosomal proteins of colorectal cancer cells
FrondiHNR_11180 (groL)
Exosomal proteins of bladder cancer cells
FrondiHNR_11180 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
WGD36994
LinkDB
All DBs
Position
complement(2447614..2449233)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKMIAFDEEARRGLERGLNTLADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDEPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
KAVEAITNQLLANAKEIETTEEIAATASISAADKEIGSIIAEAIDKVGKEGVVTVEESNS
LGTSLELTEGMRFDKGYLSAYFVTDADRQEAVFEEPYILIANSKISNIKDLLPIVDQVIQ
SGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAQLQDIAILTGGQVIS
EEVGLKLENATLDLLGRARKVVITKDETTIVEGSGDADAIAGRVAQIRKEIENTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGILPGGGVALIQA
GAAVFESLKLQGDEATGANIVRVAIEAPLRQIALNAGLEAGVVAEKVRSLPVGHGLNAAT
GEYGDLSAEGIIDPAKVTRSALQNAASIAGLFLTTEAVVAEKPEATPAPAADPTGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatgattgcttttgacgaagaagcccgacgtggtcttgagcgtggactcaac
acgctcgcagacgcggtcaaggtaacgctcggcccgcgcggtcgcaacgttgtactcgaa
aagaagtggggcgcccccaccatcaccaacgatggcgtatcaatcgccaaagagatcgaa
ctcgatgagccctatgagcgcatcggcgccgaactcgtaaaagaggtcgcgaaaaagacc
gatgatgtggccggtgacggtaccactacggcaaccgttcttgcccaggctctcgtgcgt
gaggggctgcgcaacgttgctgccggtgccgacccgatcagcctcaaacgcggaattgag
aaggctgtagaggctatcactaaccagcttcttgcaaacgctaaagagatcgagaccacc
gaggagattgcggctaccgcatccatctctgctgcagacaaagagatcggctcgatcatt
gccgaggcaatcgacaaggtgggcaaagagggtgttgttaccgttgaggagtctaactct
ctcggaacctcccttgaactcaccgagggaatgcgcttcgacaagggctacctctcggca
tacttcgtgaccgatgccgaccgccaggaggcagtctttgaggagccctacatcctcatt
gctaactccaagatcagcaacattaaggatctgctccccatcgtcgaccaggttatccag
tcgggcaagcagctcctcatcattgctgaggatgttgatggagaagctcttgcaactctc
gttgtgaacaagatccgtggaatctttaagtctgttgcggtcaaggcccccggatttgga
gatcgtcgtaaggctcagctgcaggatatcgccatcctgacgggtggacaggttatcagc
gaagaggttggtctcaagctggagaacgcaacgctcgaccttcttggacgcgcacgcaaa
gttgttattacaaaggacgagaccacaatcgtggagggttccggagacgccgatgccatc
gccggtcgcgtggctcagattcgtaaagagattgagaacaccgatagcgactacgaccgc
gagaagctgcaggagcgcctggctaagctcgctggtggtgttgccgttatcaaggccgga
gccgcaacagaggttgagctcaaggagcgcaagcaccgcatcgaagatgccgttcgcaac
gcgaaggccgccgttgaagagggtattcttcccggtggtggtgttgccttgatccaggcc
ggtgccgccgtgtttgagagcctgaagcttcagggcgatgaggcaaccggcgcgaacatt
gtacgtgttgccattgaggctcctctgcgccagattgcgttgaacgctggcctggaggcc
ggggttgttgcagaaaaggttcgtagtctgcccgttggtcacggcttgaacgccgcaaca
ggtgagtacggtgacctgagcgccgaaggaatcattgatcccgcaaaggtgacgcgttcc
gctctgcagaatgccgcatcgattgccgggctcttcctcaccaccgaggccgttgtggcg
gagaagccggaggctactcccgcacccgcagcagatcccacgggtggtatggacttctaa
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