Lysinibacter sp. HNR: FrondiHNR_11340
Help
Entry
FrondiHNR_11340 CDS
T09375
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FrondiHNR_11340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyh02000
]
FrondiHNR_11340
Transporters [BR:
lyh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FrondiHNR_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_30
AAA_29
AAA_22
AAA_16
RsgA_GTPase
nSTAND_NTPase5
AAA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WGD37023
LinkDB
All DBs
Position
complement(2486693..2487835)
Genome browser
AA seq
380 aa
AA seq
DB search
MPSDSPSIPRSSSNREGGVPPVDREGVPPADRGKDTPPESREGAPPESRGVPIHLENVSK
RYPRSVALDGITLTVEPGEFMTLLGPSGSGKTTTLNLIAGFTSLSGGSITIDGKRIDRVP
AHQRGLGVVFQHYALFPHLTVADNVAFPLKRRGVPRDQQKIRVNSALETAGLGALGERYP
AELSGGQQQRVVLARALVFEPTALLLDEPLGALDKNLREKLQLELRRIHREVGRTFVFVT
HDQEEALTLSDRIAVFNEGHIEQVGTAQELYERPSSLFVAGFIGESAMIRTPGSSRVTVL
RPERGTLLTRESEVAAGHRSVPVTVLQSIYLGSGWKYECVLPDGSTGVVRDGAEPRWRGS
PGTSALLAWNPADAVELPER
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcgattcgcctagtattccgcgcagttcctcgaatcgcgagggaggtgtgccg
cccgtggatcgagagggtgtgccacccgcagatcgtggaaaggataccccgccggaaagc
cgcgagggcgcaccgcccgaaagccgtggggttccgattcacctcgaaaacgtctcaaaa
cgatacccccgatcggttgcgcttgacggtataaccctcacagtagagccgggggagttc
atgacgctcctcggccccagcggctcgggtaagacaacaacactcaacctgatagccggg
tttacgagcctgagcggcggctccatcacgatcgacggcaagcgaatcgatcgggtgccc
gcgcaccagcgcggcctcggggtggtgtttcaacactatgccctcttccctcacttaact
gtggccgacaacgtggctttcccgctcaagaggcgtggggtgccgcgtgaccagcaaaaa
attcgtgtgaacagtgccctagagaccgcggggctgggtgctctgggagagaggtacccc
gcggaactgtcgggtggccagcagcagcgggtggtgttggcccgggcgcttgtctttgaa
ccgaccgccctgctgcttgacgaaccactgggtgcgctcgataaaaatctgcgcgaaaaa
cttcagcttgaactgcgcagaattcaccgggaggtggggcgcacctttgtgtttgtcacc
cacgaccaggaagaagccctcaccctctccgatcggattgcggtgtttaacgaggggcac
atcgaacaggtgggaaccgcgcaggaactctacgaacggccttcctccctctttgttgcc
ggattcatcggggagtcagccatgattcgcacccccggatcgagcagggtcacggttctg
aggccggagcggggaacgctgctcaccagagagtccgaggttgcggccggacacagaagt
gttcccgtgacagttttgcagagcatttatcttggatccggatggaaatacgagtgtgtt
ctgcccgatgggtcaaccggggtggtgcgcgatggagcagaacctcggtggcggggaagc
cccggaacttccgcactactcgcctggaaccccgccgacgccgttgaactgcccgagcga
tga
DBGET
integrated database retrieval system
