KEGG   Lysinibacter sp. HNR: FrondiHNR_11850
Entry
FrondiHNR_11850   CDS       T09375                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
lyh  Lysinibacter sp. HNR
Pathway
lyh00230  Purine metabolism
lyh00240  Pyrimidine metabolism
lyh01100  Metabolic pathways
lyh01232  Nucleotide metabolism
Module
lyh_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
lyh_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:lyh00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    FrondiHNR_11850 (nrdE)
   00240 Pyrimidine metabolism
    FrondiHNR_11850 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lyh03400]
    FrondiHNR_11850 (nrdE)
Enzymes [BR:lyh01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     FrondiHNR_11850 (nrdE)
DNA repair and recombination proteins [BR:lyh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    FrondiHNR_11850 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: WGD38682
LinkDB
Position
complement(2622144..2624249)
AA seq 701 aa
MDYHSLNAMLNLYDKDGNIQFDKDREAARQFFLQHVNQNTVFFHSLAEKLDYLVENHYYE
KAVLDQYSFEFISSLYDQAYAKKFRFPTFLGAFKFYTSYTLKTFDGKRYLERYEDRVVMV
ALALGQGDEKLASSLVEEIISGRFQPATPTFLNSGKQQRGELVSCFLLRIEDNMESIGRS
INSALQLSKRGGGVAFLLTNVRESGAPIKKIENQSSGIIPIMKLLEDSFSYANQLGARQG
AGAVYLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVVPDITFELAKNGEDMYLFSPYD
VERVYGVPLSDISVTEKYHEMVNDSRIRKSKINAREFFQTLAEIQFESGYPYIMYEDTVN
RANPIKGRINMSNLCSEILQVNAQTTYNADLSYDQVGKDISCNLGSMNIAASMDGGNFGQ
TVETAIRGLTAVSDMSHISSVPSIERGNDMSHAIGLGQMNLHGYLARERIFYGSEEGVDF
TNMYFYTVVYHALRASNLLSIERGETFDGFDDSTYASGTYFDKYIDQEWLPATAKVKELF
EKAGVAIPTQQDWSELRDSIMKHGIYNQNLQAVPPTGSISYINYSTSSIHPVASKIEIRK
EGKIGRVYYPAPFMTNDNLEYYQDAYEIGAEKVIDTYAAATQHVDQGLSLTLFFKDTATT
RDINKAQIYAWRKGIKTIYYIRLRQLALEGTEVEGCVSCML
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggattaccactcgctcaatgcgatgcttaacctctacgacaaagacggcaacattcag
tttgataaagatcgagaggctgcgcgtcaattctttctgcagcacgttaaccagaacacc
gtcttcttccactcgctcgccgaaaagctcgactacctggtagagaatcactactacgaa
aaggcggtgctggatcagtacagctttgagttcatcagctctctctacgaccaggcctat
gcaaagaagttccgtttccccacattcctgggggcgtttaagttctacacctcttacaca
ctgaaaacgtttgacggcaagcgttacctggagcgctacgaagaccgcgtggtgatggtc
gctcttgcgctgggacagggcgacgagaagcttgcctcctccctggtagaagagattatc
tccggccgtttccagccggcaacccccaccttcctcaactcgggcaagcagcagcgagga
gagctcgtgagctgtttcctcctgcgtatcgaggacaacatggagtccatcgggagatcc
attaactccgccctgcaactctccaagcgcggtggtggtgtcgcgttcctgctcaccaat
gtgcgtgaatcgggcgcccccatcaaaaaaatcgagaatcagtccagcggaattattccc
atcatgaaactgctggaagactcctttagctacgcaaatcagctgggcgctcggcaggga
gcgggggccgtttacctgaacgcgcatcaccccgacatcctgcgttttctcgataccaaa
cgcgaaaacgccgacgagaagatccggattaagaccctctcactcggcgtggtagttccc
gacattacgtttgagctggccaagaacggcgaggacatgtacctcttctcgccctacgac
gtagagcgggtctacggggttcctctctccgatatatcggtcaccgagaaatatcacgag
atggtcaacgactcgcgcatccgcaagagcaagatcaacgcccgtgagtttttccagact
ctcgccgagatccagttcgagtcgggatacccgtacatcatgtatgaagacaccgtcaac
cgtgccaaccccatcaaggggcgcatcaacatgtccaatctgtgttcagagatactgcag
gtcaacgcacagaccacctataacgccgaccttagctatgatcaggtcggaaaagacatc
tcctgcaaccttggttcgatgaacatcgccgcgtcgatggacgggggcaacttcggccaa
accgtcgagacggctatccgtggtttaaccgcggtgagcgacatgagccacatctcttcg
gtgccctccattgagcgtggcaacgacatgtcacacgccatcggccttggacagatgaac
ctgcacggctatctggctcgcgaacgtatcttctacggctccgaagagggtgttgacttc
accaatatgtatttctacacggtggtgtatcacgcgcttcgagcatccaacctgctctcc
atcgagcgtggcgaaaccttcgacggttttgatgattccacctacgcgtcgggaacatac
ttcgacaaatacattgatcaggagtggctgcccgccaccgccaaggttaaagaactcttc
gagaaagctggcgtcgccatccccacacagcaagactggtctgagttgcgtgactccatc
atgaaacacggaatctacaaccagaaccttcaggcggtaccccccaccgggtcaatctcg
tatatcaactactccacctcgtcgatccacccggtggcgtcaaagatcgagattcgcaaa
gagggcaagatcgggcgtgtgtactaccccgcccccttcatgacaaacgataacctcgaa
tactatcaggacgcctacgagatcggtgccgaaaaagttattgacacctatgcggccgca
acccagcacgtagaccagggcctttcgctcacactgttcttcaaagacacggcgacaacc
cgcgacattaacaaggctcagatttacgcgtggcgcaagggtatcaaaacgatctactac
atccgtctgcgtcaattggcgctcgaaggaaccgaggtagagggctgcgtgagctgtatg
ctgtaa

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