KEGG   Lysinibacter sp. HNR: FrondiHNR_12250
Entry
FrondiHNR_12250   CDS       T09375                                 
Symbol
casA
Name
(GenBank) type I-E CRISPR-associated protein Cse1/CasA
  KO
K19123  CRISPR system Cascade subunit CasA
Organism
lyh  Lysinibacter sp. HNR
Brite
KEGG Orthology (KO) [BR:lyh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lyh02048]
    FrondiHNR_12250 (casA)
Prokaryotic defense system [BR:lyh02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    FrondiHNR_12250 (casA)
SSDB
Motif
Pfam: CRISPR_Cse1 HBM
Other DBs
NCBI-ProteinID: WGD37188
LinkDB
Position
2721100..2722788
AA seq 562 aa
MNTNGLAGAESFSLITSPLIPVHYTNCDQINNISLKQLLSDAHLIERIAKPEMEEIALLR
QILLPLVIDILGSFNTDDEWKDQWNIGHFDKVGIREYFTECADLFFLFDKEKPFGQVADL
ESTSEKTKPSQVLLPSLPSGNNVPLFVPIHDGLSAKLTPSEAFFSLLITQSWAVAGIATG
MKNDPLVKAGKTTGNRIPPTASIGLVIPLGRNLFETIMLSLVVSAGDLPDSDDAPSWRSS
SSSTATWSERPAVGIRDYLSYPSRRIRLFPEITEGGALIVERVLLGAGDRLPFINPNYEP
HAMWRKNSSKSNTQVTHFPLRHRSDRESWQGLASLLAVSERKETELMTTSTLRQIARFRQ
TGVIESTYPLKVLLLGVEYGTQNAVIENLIVDEIPLPVTALAEESAIREFLEKIVQQSEN
VRNHLNHLQKRILEASKTRQEWDKGSWAGEQFIQSISVQVMRILSILTNRPENINEIQEI
WAVGARKLALDAGKKLIAKALQSPTAWHTDKTDHNGKSKLTPNIPMADVFFRSAIHKEFP
RPQELQSTDTYSITAAEGADHV
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgaatacaaatggtctcgcgggagcagagagcttctctttaataacttccccgctcata
cccgtccactacacgaactgtgaccagataaacaacattagcttgaagcagttgctgagc
gatgcacacctgatcgaacgaatcgccaaacccgaaatggaagaaatcgctctgttgcga
caaattctcctcccgcttgtgattgatattttgggtagtttcaacactgacgacgaatgg
aaagaccagtggaatattgggcattttgacaaggttgggattcgtgagtatttcacagag
tgtgctgatttattctttttgtttgataaagaaaagccctttggtcaggttgccgactta
gaatcgaccagcgaaaaaactaaaccgtctcaggttttgcttccttcacttcccagcgga
aataatgttcccttatttgtgccgattcacgacggtctcagcgcaaagctcacacccagc
gaggcgtttttctcattgctcatcactcagtcatgggcagtcgctgggatcgccaccggc
atgaagaacgaccccctcgtaaaagctggcaaaacaacaggaaacagaattccccccacc
gcttcaatcggtttagtcatccctttaggcagaaacctcttcgaaacgataatgctttct
ctcgtggtaagcgctggtgacttgcccgactcagacgatgcgcccagttggcgttcctcc
agttcatcaacggcaacgtggagcgagcgccctgccgttggcatacgtgactacctcagc
tatccttcacgtcgtatccgattgtttccagaaatcaccgaaggcggagcactcattgtc
gaacgagtgctcctcggcgctggcgaccgcctaccttttattaaccccaactatgaacca
cacgcaatgtggcggaaaaatagcagcaaaagtaatactcaagtaacacatttccccctc
cggcaccgttctgatcgtgagagctggcaggggcttgcctcccttctcgctgtttctgaa
cgaaaagaaactgagctcatgactacctcgactctccgccagattgccagatttcgccag
acaggagtcatcgagtcaacttatccgctcaaggttctgctccttggcgttgaatacggc
actcaaaacgcagtaattgaaaacctaattgttgatgaaattccacttccggtaacagct
cttgctgaagaaagtgcaatacgagaatttctcgaaaagattgttcagcagtccgaaaat
gtacggaaccacctcaaccatttacaaaaaagaatccttgaggcttcaaagaccaggcag
gagtgggacaaagggtcttgggcgggggaacagtttattcaatccataagcgttcaagtc
atgcggattctttccattctcacaaatcgtccagaaaacatcaatgagatacaagagatt
tgggccgttggtgctcgcaagttggctcttgacgccggtaaaaaactaatcgcaaaagct
ctgcaatcgccaaccgcctggcacacagacaagacggatcacaacggaaagtctaagcta
acccccaacatcccaatggccgatgttttctttagaagtgccatccacaaagaattccct
cgcccccaagaacttcaaagcactgacacatattcaataaccgcagcagaaggagccgac
catgtctga

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