Lysinibacter sp. HNR: FrondiHNR_12430
Help
Entry
FrondiHNR_12430 CDS
T09375
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FrondiHNR_12430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyh02000
]
FrondiHNR_12430
Transporters [BR:
lyh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FrondiHNR_12430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
ABC_ATPase
RsgA_GTPase
nSTAND_NTPase5
AAA_29
nSTAND1
AAA_22
NACHT
AAA_5
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WGD37221
LinkDB
All DBs
Position
complement(2758607..2759677)
Genome browser
AA seq
356 aa
AA seq
DB search
MAQLSISHVSKTFGSTRVLEPVNLNVGDGQFCCMLGSSGSGKSTLLRIIAGLEEPDEGTI
LVGSKDITRLSVEKRNIGFVFQNYALFPHLSVLANVAYGLQARRTLRKTAKKKAEDMLKL
VGLGDFGGRSPGQLSGGQQQRVALARALVTSPDLLLLDEPLSALDKKIRGEMQRELKRIH
RETGLTTVMVTHDQEEAMDLGDRVLMLDEGAVQQHDTPEMLYREPQNRFVAQFLGGQLLG
KGRVRGTGELARIEIGQLSLEASQHDLHDGQEVDVLVMAERVQILHPNDHSSTDAASGII
QTLDFFGPFARAEIDAHGLSVPVTMLSQEAEALAEGQRVQFIIAPAGLHAFAAHRV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggctcaactcagcatttctcacgtgtctaaaacgtttggctctacccgtgtactcgag
cctgtgaacctgaacgttggagacggccaattctgttgcatgctcggttcctctggctcc
ggtaaatccacactcttgcgtatcatcgcggggttagaagaacccgacgagggcactatt
ctggtgggttcgaaagacatcacccgtctttcggtggagaaacgcaatattggttttgtg
ttccaaaactatgctctctttccccacctgagtgtcctagcaaatgttgcctacggacta
caggcccgacgcacactgcggaagacggcaaagaaaaaagcggaggacatgttaaagctg
gtgggccttggagattttgggggccgttcccccgggcagctctccggcggtcagcagcag
cgcgttgctctcgcacgagcactcgtcaccagtccggacctgctcctgctcgatgagccg
ttgagcgccctggacaagaaaatccggggtgagatgcagcgtgaactgaagcgcatccac
agagaaaccgggctgaccaccgtcatggtgacccacgatcaagaagaggcaatggacctg
ggcgaccgggtgctcatgctcgacgagggagcggtgcaacagcacgacaccccagagatg
ctgtatcgagagccgcagaatcgctttgttgcccagttcttgggtggccagttgttgggt
aagggtcgagtgcgcggcacaggagaattggcgcgaatcgagatcgggcagctcagcctg
gaagcttcacagcacgatctacatgacggccaggaggttgatgttctggtgatggcggaa
cgggtgcagattcttcacccgaatgatcactcctctaccgatgcggcctcaggaattatc
cagacgctagatttctttggtccgtttgcgcgggcagagattgacgctcacggcctcagc
gttcctgtcaccatgctctcacaggaggcagaagctctcgcggagggacaacgggttcaa
ttcatcattgccccggctgggctgcatgcttttgcggctcatcgcgtttga
DBGET
integrated database retrieval system
