Lysinibacter sp. HNR: FrondiHNR_12560
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Entry
FrondiHNR_12560 CDS
T09375
Symbol
pdxT
Name
(GenBank) pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
KO
K08681
pyridoxal 5'-phosphate synthase pdxT subunit [EC:
4.3.3.6
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00750
Vitamin B6 metabolism
lyh01100
Metabolic pathways
lyh01240
Biosynthesis of cofactors
Module
lyh_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
FrondiHNR_12560 (pdxT)
Enzymes [BR:
lyh01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
FrondiHNR_12560 (pdxT)
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Motif
Pfam:
SNO
GATase_3
Peptidase_S51
Peptidase_C26
GATase
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
WGD37244
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Position
complement(2794550..2795188)
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AA seq
212 aa
AA seq
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MYPRHTASPNVAGSRYSVGVLALQGDFREHLEVLTALGADARSVRRPEELDAVDGLIIPG
GESSVMDKLSRLFGLDQPLREAIARGLPVYGTCAGLIMLATTILDGNAGQQSLRALDIEV
RRNAFGSQTSSFEADLDVPELGDEPLRAVFIRAPVVERLGPEVRPLAALDDGRVVAVEQG
GVLGTSFHPEITGDTRFHEYFLKKVERFRAVA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtacccgcgccacaccgcctcgccgaacgtggctggtagccgctattccgttggtgtt
cttgcgctccagggggacttccgtgagcatcttgaggtgctcacggccctgggcgcggat
gcccgtagtgtgcgtcgcccggaggagctcgatgctgtcgacgggctgattatccccggt
ggcgagtcgagcgtgatggataagctctctcgcctctttggactagatcagcctctgagg
gaggcgattgctcgcggactgcccgtctacggaacgtgcgcggggctcattatgctggcc
acaactatcctcgatggtaacgccgggcagcagagcctccgcgcacttgatattgaggtg
cgacgcaacgcttttgggtctcagacctcgtcttttgaggccgatcttgatgtccctgag
ctgggtgatgagccgctgcgtgcggtttttatccgcgctcccgttgttgagcggctcggt
cccgaagtgcgccccctggccgctcttgatgacgggcgggtggtggcagttgagcagggt
ggcgtgctgggcacgtcgtttcacccggagatcacgggggacacccggtttcatgagtac
ttcttgaaaaaagtggagcgctttcgcgcggtggcatga
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