Lysinibacter sp. HNR: FrondiHNR_12565
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Entry
FrondiHNR_12565 CDS
T09375
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00750
Vitamin B6 metabolism
lyh01100
Metabolic pathways
lyh01240
Biosynthesis of cofactors
Module
lyh_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
FrondiHNR_12565 (pdxS)
Enzymes [BR:
lyh01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
FrondiHNR_12565 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
TetR_C_27
NMO
IGPS
NanE
IMPDH
Glu_synthase
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
WGD37245
LinkDB
All DBs
Position
complement(2795148..2796050)
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AA seq
300 aa
AA seq
DB search
MTEKNITEEFGSNRVKRGLAEMMKGGVIMDVVTAEQARIAEDAGAVAVMALERVPADIRS
QGGVARMSDPDLIDQIIEAVNIPVMAKARIGHFVEAQVLEALKVDYIDESEVLSPADYVN
HIDKWKFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSEATKHIRKIRSEVAAL
SALSKDELYVAAKELQAPYDLVAEVAATGKLPVVLFTAGGVATPADAAMMMQLGADGVFV
GSGIFKSGNPAKRAAAVVKATTYFDDPAVIAEVSRGLGEAMVGINVADVPAPHRLAERGW
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaaaacatcactgaagagttcggctccaatcgcgtgaagcgaggcctcgca
gaaatgatgaagggcggcgtcatcatggacgttgtcaccgccgaacaggcccgcatcgcg
gaggatgccggagctgttgcggtgatggcgcttgagcgggtacccgcagacatccgctcg
cagggtggcgttgcccgtatgagcgaccccgacctgatcgatcagatcatcgaggctgtc
aatattcccgtgatggcaaaggcccgcatcgggcactttgttgaggcgcaggttcttgag
gcgctgaaggtcgactacattgacgagtccgaggttctgagccccgcggactacgtgaac
cacatcgataagtggaagttcacggttccttttgtctgcggcgcaaccaacctgggggag
gcgctgaggcgcattaacgagggtgctgcgatgatccgttccaagggtgaggccggcacc
ggagacgtttcggaggcaaccaagcatattcgcaagatcaggagcgaggttgcggcgctc
tccgcgctgagcaaagacgagctgtatgttgcggctaaagaacttcaggccccgtatgat
ctggttgccgaggttgccgccaccggcaagcttcccgttgtgctcttcaccgccgggggt
gttgccactcctgccgatgccgctatgatgatgcagctgggagccgacggggtgtttgtt
ggttccgggatttttaagtcgggcaaccccgccaaacgagccgccgccgtggtgaaagcc
accacctacttcgatgaccccgccgttattgccgaggtgtcacggggattgggtgaggca
atggtgggaatcaacgttgcggatgtacccgcgccacaccgcctcgccgaacgtggctgg
tag
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