Marilutibacter alkalisoli: FKV23_01830
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Entry
FKV23_01830 CDS
T06167
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
lyj
Marilutibacter alkalisoli
Brite
KEGG Orthology (KO) [BR:
lyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyj03016
]
FKV23_01830
Enzymes [BR:
lyj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
FKV23_01830
Transfer RNA biogenesis [BR:
lyj03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
FKV23_01830
Prokaryotic type
tRNA splicing ligases
FKV23_01830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Hexapep
Gam
Motif
Other DBs
NCBI-ProteinID:
QDH68979
UniProt:
A0A514BPM9
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All DBs
Position
complement(425356..426582)
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AA seq
408 aa
AA seq
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MNTQHDNYEFLHAEGAATPIKGWVRGVPLETQAHRQLQNIAALPFVGPWVAVMPDVHLGK
GATVGSVVPTRGAIIPAAVGVDIGCGMAAVRTTLRASDLPDSLSQLRNSIERSVPVGNGP
GGNHRRVPDSINTRLVKSGLAERLALIRQKHPKIRPDRIDVQAGTLGGGNHFIEICLDES
GAVWVMLHSGSRGTGNLVGTYFIELARRQLEKRLLGFHLPDKDLAFFLEGEPLFDDYVEA
VSWAQDYARANREAMMERVLHEMRHRLPKFQLEKLAVNCHHNYVQREQHGGESLLVTRKG
AVSAREGELGIIPGSMGTRSYIVRGKGNADSFHSCSHGAGRVMSRTAARNSITLKQHREA
TAHVECRKDAGVIDESPAAYKSIDAVMAAQTDLVEVVHTLRQVVCIKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacaacacgacaactacgagttcctccatgccgagggcgcggccacgccgatc
aagggctgggtgcgcggcgtgccgctggagacgcaggcccaccggcagttgcagaacatc
gccgcgctgcccttcgtcggcccgtgggtcgcggtcatgccggacgtgcacctgggcaag
ggcgcgacggtcggttcggtcgtgcccacccgcggcgcgatcatcccggccgcggtcggc
gtcgacatcggctgcggcatggccgcggtgcgcaccaccctgcgcgcgagcgacctgccc
gacagcctgtcgcagctgcgcaactcgatcgagcgcagcgtaccagtcggcaatggtccc
ggcggcaatcaccgtcgggtgccggacagcatcaacacgcggctggtgaagtcgggcctg
gccgagcggctggcgctgatccgccagaagcacccgaagatccgcccggacaggatcgac
gtgcaggccggcaccctcgggggtggcaaccacttcatcgagatctgcctcgacgagtcg
ggtgcggtgtgggtgatgctgcactcgggttcgcgcggcaccggcaacctggtcggcacc
tatttcatcgaactggcccggcgccagctggagaagcgcttgctcggcttccatctgccg
gacaaggacctcgcgttcttcctcgagggcgagccgctgttcgacgactatgtcgaagcg
gtgtcgtgggcgcaggactacgcccgtgccaatcgcgaggcgatgatggagcgggtgctg
cacgagatgcgccaccgcctgccgaagttccagctcgagaagctggcggtgaactgccac
cacaactacgtgcagcgcgagcagcacggcggcgagtcgctgctggtgacccgcaagggc
gcggtcagcgcccgcgagggcgagctgggcatcatccccggcagcatgggcacgcgcagc
tacatcgtgcgtggcaagggcaacgcggacagcttccacagctgcagccacggcgccggc
cgggtgatgagccggaccgcggcgaggaacagcatcaccctcaagcagcaccgcgaggcc
accgcccatgtcgagtgccgcaaggacgccggcgtgatcgacgagtcgccggcagcctac
aagtcgatcgacgcggtcatggccgcgcagaccgacctggtcgaggtggtgcacacgctg
cgccaagtggtctgcatcaagggctga
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