Marilutibacter alkalisoli: FKV23_09170
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Entry
FKV23_09170 CDS
T06167
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lyj
Marilutibacter alkalisoli
Pathway
lyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FKV23_09170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyj03019
]
FKV23_09170
03009 Ribosome biogenesis [BR:
lyj03009
]
FKV23_09170
Enzymes [BR:
lyj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FKV23_09170
Messenger RNA biogenesis [BR:
lyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FKV23_09170
Ribosome biogenesis [BR:
lyj03009
]
Prokaryotic type
rRNA helicases
FKV23_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Flavi_DEAD
NNH6
adh_short
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QDH70244
UniProt:
A0A514BS77
LinkDB
All DBs
Position
2128522..2130426
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AA seq
634 aa
AA seq
DB search
MNDDIPSPSLKFSDLALPEPLLKALSDVGYESPSPIQAATIPPLLEGRDVLGQAQTGTGK
TAAFALPVLARAKPGQKKPRALVLAPTRELAIQVAEAFQKYAHHLPGFHVLPIYGGQSYG
PQLAALRRGVDVVVGTPGRIIDHLERGSLDLSELDCLVLDEADEMLRMGFIDDVEAVLKK
TPETRQVALFSATMPSQIKRIAQTYLKDPVEIAIKTKTSTAANIRQRYWSVSGVHKLDAL
TRILEAEPFDAMIIFARTKLGTDELAEKLTARGFSAAAINGDVQQAQREKTVQQLKDGRI
DVLVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVTPRERGM
LRAIERATRQPIEPMELPSIDTVNEQRVNKFLDRIGESLERADLTLFRDLVERYEREKNV
PMAEIAAALAGMVQGDRPLLLDAPKERPRPERSRPGFDKPGFDKPGFDKPGFDKRGADRP
GSDRAPRNRAEAMFDDDAPRPRRERTTHEPEAGMETFRIEVGHVHGVKPGNIVGAIANEA
ELESRYIGRIDIQQDHSYVDLPEGMPRELMEHLKKVRVAGQPLRISRPRDLPEGGPAPAL
RDGRPPRRPHPGKPHGKPHGKAGPRGPKKPHRGR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgacattccttccccttccctcaagttcagcgatctggccctgcccgagccg
ctgctcaaggcgttgtccgatgtcggctacgagtcgccctcgccgatccaggccgcgacc
atcccgccgctgctcgaaggccgtgacgtgctgggccaggcccagaccggcaccggcaag
accgccgcattcgcgctgccggtcctcgcccgtgccaagcccgggcagaagaagccgcgg
gcactggtgctggcaccgacccgcgagctggcgatccaggtcgccgaggcgttccagaag
tacgcccaccacctgcccggcttccacgtgctgccgatctacggcggccagagctacggg
ccgcagctggcggcgctgcggcgtggcgtcgatgtggtggtcggcaccccgggtcggatc
atcgaccacctcgagcgcggctcgctggacctgtccgagctggactgcctggtcctcgac
gaggccgacgagatgctgcggatgggcttcatcgacgatgtcgaggcggtgctgaagaag
acccccgagacccgccaggtcgcgctgttctcggccaccatgccgagccagatcaagcgc
atcgcccagacctacctcaaggacccggtcgagatcgcgatcaagaccaagaccagcacc
gctgccaatatccgccagcgttactggtcggtcagcggcgtgcacaagctcgacgcgctg
acccgcatcctcgaagccgagccgttcgacgcgatgatcatcttcgcccgcaccaagctc
ggcaccgacgaactggccgagaagctgaccgcgcgcggcttctccgccgccgcgatcaac
ggcgacgtgcagcaggcccagcgcgagaagaccgtacagcagctcaaggacggtcgcatc
gacgtactggtcgccaccgacgtggccgcccgcgggctcgacgtggaacggatcagccac
gtgctgaactacgacatcccctacgacaccgagagctacgtccaccgcatcggccgcacc
gggcgggccggccgcagcggcgaggcgatcctgttcgtgaccccgcgcgagcgcggcatg
ctgcgcgcgatcgagcgcgcgacccggcagccgatcgagccgatggagttgccgagcatc
gataccgtcaacgagcagcgggtcaacaagttcctcgatcgcatcggcgaatcgctggag
cgtgccgacctgaccctgttccgcgacctggtcgaacgctacgagcgcgaaaagaacgtg
ccgatggccgagatcgccgcggcactggccggaatggttcaaggcgaccggccactgttg
ctggacgccccgaaggagaggccacggcccgaacgcagccggcccggtttcgacaagccc
ggtttcgacaagccgggctttgacaagcctggtttcgacaagcgcggtgccgacaggccc
ggcagcgaccgcgcgccgcgcaaccgtgccgaagcgatgttcgacgacgacgctcctcgc
ccgcgccgcgaacgcaccacgcatgaacccgaagccggcatggagaccttccgcatcgag
gtcggccacgtgcatggggtcaagcccggcaacatcgtcggcgccatcgccaacgaggcc
gaactggaaagccgctatatcggccgcatcgacatccagcaggaccacagctacgtcgac
ctgcccgaaggcatgccacgcgagctgatggagcacctgaagaaggtccgcgtcgccggc
cagccgctgcggatcagccgtccgcgcgacctgcctgagggcggtcctgccccggccctt
cgcgacggtcgcccgccgcggcgcccgcacccgggcaagccgcacggcaaaccgcacggc
aaggccggtccgcgcggacccaagaagccgcatcgcggccgctga
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