Marilutibacter alkalisoli: FKV23_11555
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Entry
FKV23_11555 CDS
T06167
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lyj
Marilutibacter alkalisoli
Pathway
lyj03030
DNA replication
lyj03430
Mismatch repair
lyj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FKV23_11555 (dnaE)
03430 Mismatch repair
FKV23_11555 (dnaE)
03440 Homologous recombination
FKV23_11555 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyj03032
]
FKV23_11555 (dnaE)
03400 DNA repair and recombination proteins [BR:
lyj03400
]
FKV23_11555 (dnaE)
Enzymes [BR:
lyj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FKV23_11555 (dnaE)
DNA replication proteins [BR:
lyj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FKV23_11555 (dnaE)
DNA repair and recombination proteins [BR:
lyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FKV23_11555 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QDH70642
UniProt:
A0A514BTD3
LinkDB
All DBs
Position
2643006..2646527
Genome browser
AA seq
1173 aa
AA seq
DB search
MSAPRFIHLHLHSEYSLADSTVRIGELVKRCVEHGQPAVAITDIDNVFAAVKFYRKAEGA
GIKPIIGADIGLADGNEPTSRLTLLCRDREGYLTLSRLLTRVWMEGHRTDSVAMRPEWLR
EDNAGLFVLAGRHSLAGRLTVANKHEHAEAWLADWQGVFDDRLHIELTRAGRDGEEAFNN
FALHASAKRGLPVVASNDVRFLDRDGFEAHEARVCIASGRVLDDPKRPKDYTPEQYLKST
EEMAALFADVPDAIDNALALAMRCNVEMKLGEYALPAFPVPADHTIESWLRNEAREGLKK
RLEKAPLAEGRTRQDYEDRLETELDVIISMGFPGYFLIVADFINWGKQHDIPVGPGRGSG
AGSLVAWALGITDLDPLPYDLLFERFLNPERVSMPDFDIDFCMDRRDEVIEYVARKYGRD
RVSQIITYGTMAAKAVVRDSGRVLGHPYGLVDGIAKLIPNTLGISLSDAMGETEKSRAAE
GLASPDLIERYNSDEEVRDLIDLARSLEDLTRNAGKHAGGVVIAPSPLSDFCPLYAEHDG
EGRGRNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINARLAKEGQAPLDITALP
LDDKASYELFARGDTVAVFQFESRGMRELLKRAMPDTFEDIIALAALFRPGPLGSGMDKE
WVDRKHGRTEVSYPHPLLEPVLAPTYGVIVYQEQVMQIAQVLAGYSLGGADLLRRAMGKK
KAEEMAKERAKFEAGCAERGIDAKVATPIFDLMEKFAEYGFNKSHSAAYALVAYQTAWLK
VHYPAEFMAAVLSSDMDNTDKVTGFLDECRVMELEVLPPDVAHSEYMFQAVAPNTIRYGL
GAVKGVGRGVCEAIVEARRAGPFNDLLDFCKRVDGGKLNRRALEALTQAGALDALGKNRA
SLMLQLPEVLKATEQLARERAAGQVSLFGGGESQAAELHIDLPEVEEWSLARLLNGERET
LGHYLSGHPFDPCRDELRSLLGHDLGDLEKIWESRPESARSGWRPEIETVVAGQVVAMRK
KGDSQMFVQIEDGRGRLECAFFAEAYAEYAHLFTRDRLLIVQGGLREDSFSGGFALKAQR
CWDYDSVCANHARRLSLRLDLRVPGIWQRVDELLASHRPGKTPIRLDLLRPGAAGMLDLN
GEHAVRVDAELTGTLRALPGVKAVKLALARPWG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccccgcttcatccacctccatctgcatagcgaatactcgctggccgactcc
accgtccggatcggcgagctggtcaagcgctgcgtcgagcacggccagccggcggtcgcg
atcaccgatatcgacaacgtgttcgccgcggtcaagttctatcgcaaggccgagggcgcc
ggcatcaagccgatcatcggcgccgacatcggcctggccgacggcaacgagccgacctcg
cgcctgaccctgctatgccgcgaccgcgaaggctacctcacgctgtcccgactgttgacc
cgagtgtggatggaaggccaccgcaccgacagcgtcgcgatgcgcccggaatggctgcgc
gaggacaacgcaggcctgttcgtgctggccggccgccacagcctggccgggcgcctgacc
gtcgccaacaagcacgagcatgccgaggcctggctggccgactggcagggcgtgttcgac
gaccgcctgcatatcgaactgacccgcgccggacgcgacggcgaagaagcgttcaacaac
ttcgcgctgcacgcctcggccaagcgcggattgccggtggtcgccagcaacgacgtgcgc
ttcctcgaccgcgacggcttcgaggcgcacgaggcgcgcgtgtgcatcgcctcgggccgc
gtgctcgacgaccccaagcggcccaaggactacacgcccgagcagtacctgaagtcgacg
gaagaaatggcggcgctgttcgccgacgtcccggacgcgatcgacaacgcgctcgcgctg
gcgatgcgctgcaatgtcgagatgaagctcggcgaatacgcgctgccggcgtttccggtt
ccagccgatcacaccatcgaatcgtggctgcgcaacgaagctcgcgagggcctgaaaaaa
cggctggagaaagccccgctcgcagaaggcaggacccgccaggactacgaagaccggctc
gagaccgaactggacgtcatcatctcgatggggttccccggctacttcctgatcgtcgcg
gacttcatcaactggggcaaacagcacgacatcccggtcggcccggggcgcggttcgggc
gccggttcgctggtggcgtgggcgctgggcatcaccgacctcgacccgctgccgtacgac
ctgctgttcgagcgcttcctcaaccccgaacgcgtgtcgatgcccgacttcgacatcgac
ttctgcatggaccgccgcgacgaggtgatcgaatacgtcgcgcgcaagtacggccgcgac
cgggtcagccagatcatcacctacggcaccatggcggcgaaggcggtggtgcgcgattcg
ggccgcgtgctcggccacccgtacggcctggtcgacggcatcgccaagctgatcccgaac
acgctgggcatctcgctttccgacgcgatgggcgagaccgagaagtcgcgcgcggccgaa
gggctggcatcgcccgacctgatcgagcgctacaacagcgacgaggaagtgcgcgacctg
atcgatctggcgcgcagcctcgaggacctgacccgcaacgccggcaagcacgccggcggc
gtggtgatcgcgccttcgccgctgtccgacttctgcccgctgtacgccgaacacgacggc
gagggccgcggcaggaacccggtcacccaattcgacaaggacgacgtcgaggcggtcggc
ctggtcaagttcgacttcctcggcctgcgcacgctgacgatcatcgattgggcggtgaag
gcgatcaacgcgcggctggcaaaggaaggccaggccccgctcgacatcaccgcactgccg
ctggacgacaaggccagctacgagctgttcgcgcgcggcgacacggtcgcggtgttccag
ttcgaatcgcgcggcatgcgcgagctgctcaagcgcgcgatgcccgacaccttcgaggac
atcatcgcgctcgcggcattgttccgccccggtccgctcggctcggggatggacaaggaa
tgggtcgaccgcaagcacggccgcaccgaggtcagctacccgcacccgctgctggaaccg
gtgctggcgccgacctacggcgtcatcgtctaccaggaacaggtgatgcagatcgcccag
gtcctggccggctactcgctgggcggcgccgacctgctgcgtcgcgcgatgggcaagaag
aaagccgaggagatggcgaaggaacgcgccaagttcgaggccggctgcgccgagcgcggg
atcgacgccaaggtggcgacgccgatcttcgacctgatggagaagttcgccgagtacggc
ttcaacaagtcgcactcggccgcctacgcgctggtcgcgtaccagaccgcgtggctgaag
gtgcactacccggccgagttcatggccgcggtgctgtcctcggacatggacaacaccgac
aaggtcaccggcttcctcgacgaatgcagggtgatggagctggaggtgctgccgccggac
gtcgcgcattcggagtacatgttccaggccgtggcgcccaatacgatccgctacggcctg
ggcgcggtgaagggcgtcggccgcggcgtctgcgaggcgatcgtcgaggcgcgccgcgcc
ggcccgttcaacgacctgctcgacttctgcaagcgcgtcgacggcggcaagctcaaccgt
cgcgccctcgaagcgttgacccaggccggagcgctcgatgcgttggggaagaatcgcgcc
agcctgatgctgcagttgccggaagtgctcaaggccaccgaacagctcgcccgcgagcgc
gcggccgggcaggtatcgctgttcggcggtggcgaatcgcaggcggcggaactgcacatc
gacctgcccgaggtcgaagaatggtcgctggcgcggctgctcaatggcgagcgcgagacc
ctcggccactacctcagcgggcatccgttcgatccgtgccgcgacgagctgcgcagcctg
ctcggccatgacctcggcgacctcgagaagatctgggaatcgcgccccgaatcagcgcgc
agtggctggcggccggaaatcgaaaccgtcgtcgccggccaggtggtggcgatgcgcaag
aagggcgacagccagatgttcgtgcagatcgaggacggccgcggccggctcgaatgcgcc
ttcttcgccgaggcctacgccgagtacgcgcacctgttcacccgcgaccgcctgctgatc
gtccagggcggcctgcgcgaggacagcttcagcggcggtttcgcgctcaaggcccagcgc
tgctgggactacgacagcgtctgcgccaaccacgcccggcgactgtcactgcggctggac
ctgcgcgtgccgggcatctggcaacgcgtcgacgagctgcttgccagccatcgccccggc
aagacaccgatccggctcgacctgctgcgtcccggtgccgccggcatgctcgacctcaat
ggcgaacacgcggtccgcgtcgacgccgaactgaccggcaccctgcgcgccctgcccggc
gtcaaggcggtcaagctggcactggcgcggccctggggctga
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integrated database retrieval system
