Marilutibacter alkalisoli: FKV23_15430
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Entry
FKV23_15430 CDS
T06167
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lyj
Marilutibacter alkalisoli
Pathway
lyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FKV23_15430 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyj03019
]
FKV23_15430 (rhlB)
Enzymes [BR:
lyj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FKV23_15430 (rhlB)
Messenger RNA biogenesis [BR:
lyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FKV23_15430 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RhlB
ResIII
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QDH71325
UniProt:
A0A514BVI4
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All DBs
Position
complement(3492648..3494402)
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AA seq
584 aa
AA seq
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MSDKPLTDVTFESFGLHPSLLAGLEGAGFTRCTPIQAMTLPIALAGRDVAGQAQTGTGKT
LAFLVAVMNRLLTRPALAERKPEDPRALILAPTRELAIQIHKDAVKFGSDLGLKFALVYG
GVDYDKQRSILQEGADIIIATPGRLIDYVKQHKVVSLHACETCVLDEADRMFDLGFIKDI
RFLLRRMPIRTERQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRMYFPA
DEEKIPLLLGLLSRSETARTMVFVNTKVFVERVARALEKAGHRVGVLSGDVPQKKRESLL
GRFQKGQLDILVATDVAARGLHIDGISHVYNYDLPFDAEDYVHRIGRTARLGAEGDAVSF
ACERYAMSLPDIEAYIEQKIPVEPVTPDLLIAVPRAPRETPAGEESESVSAIFREAREQR
AADEERRGGGKGRGRGERGGRSHSGERGPRRGSGEGRRADGEQVAGARAAGEQAAGGQAA
RPPRGPKPAAGDVAPANAAAEGEAHKPRKRRRRRGGRRVEGADAAAAVPASAERNSNGPT
QVPANKVRPAKLSTKTADGDKPGLFARIGRGLKSLVTRAPRSQH
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaacccctgaccgatgtcaccttcgagtccttcggcctgcacccgagcctg
ctggccgggctggaaggcgccggattcacccgctgtaccccgatccaggccatgaccctg
ccgatcgccctggccggccgcgacgtcgccggccaggcccagaccggcaccggcaagacc
ctggccttcctggtcgcggtgatgaaccgcctgctgacccgcccggccctggccgagcgc
aagcccgaggatccgcgcgcgctgatcctggcgccgacccgcgagctggcgatccagatc
cacaaggacgcggtcaagttcggcagcgacctggggctcaagttcgccctggtctacggc
ggtgtcgactacgacaagcagcgttcgatcctgcaggaaggcgccgacatcatcatcgcc
accccgggccgcctgatcgactacgtcaagcagcacaaggtggtcagcctgcacgcctgc
gagacctgtgtgctggacgaggccgaccgcatgttcgacctcggcttcatcaaggacatc
cgcttcctgctgcggcgcatgccgatccgcaccgagcgccagaccctgctgttctcggcc
accctcagccaccgcgtgctggagctggcctacgagcacatgaacgagccggaaaagctg
gtggtcgagaccgagaccatcaccgccgcgcgggtccggcagcgcatgtacttcccggcc
gacgaggagaagatcccgctgctgctgggcctgctgtcgcgcagcgagacggcgcgcacg
atggtgttcgtcaacaccaaggtgttcgtcgagcgcgtcgcccgcgcactggaaaaggcc
ggccaccgcgtcggcgtgctgtccggcgacgtgccgcagaagaaacgcgagtccctgctg
gggcggttccagaaaggccagctggatatcctggtggctaccgacgtcgccgcccgtggc
ctgcacatcgacggcatcagccacgtctacaactacgacctgccgttcgatgccgaggat
tacgtgcaccgcatcggccgcaccgcgcgcctgggcgccgagggcgacgccgtcagcttc
gcctgcgagcgctatgcgatgagcctgccggatatcgaggcgtacatcgagcagaagatc
ccggtcgaaccggtgacccccgacctgctgatcgcggtgccgcgtgcgccgcgcgagacc
ccggccggtgaggaaagcgagagcgtcagcgcgatcttccgcgaggcgcgcgagcagcgc
gctgccgacgaggagcgccgtggcggtggcaagggccgcggacgtggcgagcgcggtgga
cgttcgcacagcggcgagcgcggtccacgccgcgggagcggtgaaggccggcgtgccgat
ggagaacaggtcgctggagcgcgcgccgctggagagcaggctgctggagggcaggccgca
cgtccgccacgcgggccgaagccggcggcgggcgacgtggcgccggcgaatgccgctgcc
gaaggcgaggcccacaagccgcgcaagcgccgccgccgtcgcggtggtcgccgggtcgag
ggcgcggatgccgctgccgccgtgccggccagcgcggagcgcaacagcaacggtccgacc
caggtgccggccaacaaggtgcgcccggccaagctgtcgacgaagaccgccgatggggac
aagcccggcctgttcgcgcgcatcggccgtggcctgaagtcgctggtcacccgcgcaccg
cgttcgcagcattga
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