Protaetiibacter larvae: FLP23_03830
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Entry
FLP23_03830 CDS
T06178
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lyk
Protaetiibacter larvae
Pathway
lyk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lyk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FLP23_03830 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyk03021
]
FLP23_03830 (rpoC)
03400 DNA repair and recombination proteins [BR:
lyk03400
]
FLP23_03830 (rpoC)
Enzymes [BR:
lyk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FLP23_03830 (rpoC)
Transcription machinery [BR:
lyk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FLP23_03830 (rpoC)
DNA repair and recombination proteins [BR:
lyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FLP23_03830 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PhaP_Bmeg
Motif
Other DBs
NCBI-ProteinID:
QEO09216
UniProt:
A0A5C1Y601
LinkDB
All DBs
Position
827888..831763
Genome browser
AA seq
1291 aa
AA seq
DB search
MIDATTFDQLRIGLATSADIRAWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
SCGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVINVDEDGRHADLPGLENELRLEVKALEQQRDSRISDRLVQLEAD
LAALEEEGAKADQKRKVKDASDKETGQIRKSYDEQIDQLERVWEAFRTLKVGDLKAEDSV
FHELQDRYGLYFEAYMGAEAIQRRLQAFDLEAEAELLHDQIANGKGQKKIRAIKRLRVVN
SFLQTGNSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKAAKRMVERSR
PQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCTAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKEGAVGEGR
AFSSISEAILAKDEGTLDLNALVKIRLEGVYLENADDDFVQGSTKVLQTTLGRALFNQAL
PVDYWYTEAVADKGKISAIVNDLAERYPKVEVAAALDRIKDAGFHWATRSGVTVALSDII
TPKDKPAIVSKHEKQAAKIQGEFDKGLIDDATRRKELIDIWTEATNEIAASMQESYPKDN
NIFRMVSSGARGNWLQVRNISGIRGLVANPKGETIARPIISSYREGLSVAEYFIATHGAR
KGLADTALRTADSGYLTRRLVDVAQDVIIREDDCGTSKGLELRIAVKGADGVLVRDENVE
NSVYARSLAEDAVDATGAVVAEAGSDVGDVLIAKLIAAGVETVKVRSVLTCESAVGVCAA
CYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHQGGTAGADDITQGLPRVTELF
EARTPKGASPIAEAAGRIEIEDTERQRRIILTPDNGDEPQIYPVLKRATLLVEDGQHVEL
GQQFVVGNLDPKEVLRVQGVRAVQLHLVDGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VEHGDTELLPGELVDRSRYNEINRAALTEGKKTASARQEVMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGRSDPLVGLKENVIIGQLIPAGTGLSKYRNVSVDATEEAKAERYPNRI
FADDSAFSEADLSFVDFDSFSSDDFQPGTYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgcaaccactttcgatcagcttcggatcggcctggcgacgagcgcggacatc
cgcgcctggagctacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggtctgttcggtgagcagatcttcggaccctcccgcgactgggagtgc
tcctgcggcaagtacaagcgcgtgcgcttcaagggcatcgtctgcgagcgctgcggcgtg
gaggtcaccaagagctccgtccgtcgcgagcgcatgggccacatcgagctcgccgcgccc
gtcacgcacatctggtacttcaagggtgtgccgagccgcctcggctacctcctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatggtcatcaacgtcgac
gaggacggccgccacgccgacctccccggcctcgagaacgagctccggctcgaggtgaag
gcgctcgagcagcagcgcgacagccgcatcagcgaccgtctcgtgcagctcgaggccgac
ctcgccgcgctcgaggaggagggcgccaaggccgaccagaagcgcaaggtcaaggacgcc
tccgacaaggagaccggccagatccgcaagtcgtacgacgagcagatcgaccagctcgag
cgcgtgtgggaggccttccgcaccctcaaggtcggcgacctgaaggcggaggactcggtc
ttccacgagctgcaggaccgttacggcctgtacttcgaggcctacatgggtgccgaggcg
atccagcgtcgcctgcaggcgttcgacctcgaggccgaggcggagctgctgcacgaccag
atcgcgaatggcaagggtcagaagaagatccgcgccatcaagcgtctgcgggtcgtgaac
tccttcctgcagaccggcaactcgccggccgccatggtgctggatgtcgtcccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggcggccgcttcgcgaccagcgacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgtctgcgtcgtctgctcgacctc
ggggcccccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgcccggtcaccggcaccggcaaccgtgcgctcaag
agcctgtccgacatgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtggactactcgggccgttcggtcatcatcgtgggtccgcagctcaagctgcaccag
tgcggtctgccgaagcagatggcgctcgagctgttcaagccgttcgtcatcaagcgcctc
atcgacctctcgcacgcgcagaacatcaaggctgccaagcgcatggtcgagcgttcgcgc
ccgcaggtgtgggatgtgctcgaggagatcatccgcgagcgccccgtgctgctgaaccgc
gcccccaccctgcaccgtctcggcatccaggcgttcgagccgcagctcgtggagggcaag
gccatccagctgcacccgctcgtctgcaccgcgttcaacgccgacttcgacggcgaccag
atggccgtgcaccttcccctctcggtggaggcgcaggccgaggcccgcatcctgatgctc
gcctcgaacaacatcctgaagccgtcggacggccgcccggtcaccctgccctcgcaggac
atgatcatcggtctgcaccacctgaccacggtcaaggagggtgccgtcggcgagggtcgt
gcgttctcgtcgatctccgaggcgatcctcgccaaggatgagggcacgctcgacctcaac
gcgctcgtcaagatccgtctcgagggcgtgtacctcgagaacgcggacgacgacttcgtg
cagggctcgacgaaggtgctccagaccacgctcggccgcgcgctgttcaaccaggcgctt
ccggtggactactggtacaccgaggccgtcgccgacaagggcaagatctccgcgatcgtc
aacgacctcgcggagcgctaccccaaggtggaggtcgccgcggcgctcgaccgcatcaag
gacgccggcttccactgggccacccgctcgggtgtcaccgtcgccctgtcggacatcatc
acgccgaaggacaagcccgcgatcgtgtccaagcacgagaagcaggccgccaagatccag
ggcgagttcgacaagggtctcatcgacgacgccacgcgccgcaaggagctcatcgacatc
tggacggaggcgaccaacgagatcgccgcgtcgatgcaggagagctacccgaaggacaac
aacatcttccggatggtgtcgtcgggcgcccgtggtaactggctgcaggtgcgcaacatc
tcgggtatccgcggcctcgtcgcgaacccgaagggtgagaccatcgcgcgtccgatcatc
tcgtcgtaccgcgagggcctgtcggtggcggagtacttcatcgccacgcacggtgcccgt
aagggcctcgccgacacggcgctgcgcaccgcggactccggctacctgacgcgtcgtctc
gtcgacgtcgcgcaggatgtcatcatccgcgaggacgactgcggcacctcgaagggtctc
gagctgcgcatcgcggtcaagggcgccgatggcgtgctggtccgcgacgagaacgtcgag
aactcggtctacgcccggtcgctcgccgaggacgccgtcgacgccacgggcgccgtggtg
gccgaggccggctcggacgtcggcgacgtgctcatcgcgaagctcatcgccgcgggcgtc
gagacggtcaaggtgcgctccgtgctcacctgcgagtcggcggtcggcgtctgcgccgcc
tgctacggccgttcgctcgcgaccggcaagctcgtggacatcggcgaggcggtcggcatc
atcgccgcccagtcgatcggcgagcccggaacgcagctcacgatgcgtaccttccaccag
ggtggtaccgccggtgcggacgacatcacgcagggtctgccgcgcgtcaccgagctcttc
gaggctcgcactccgaagggcgcgagcccgatcgcggaggccgcgggtcgcatcgagatc
gaggacaccgagcgtcagcgtcgcatcatcctgactcccgacaacggcgacgagccgcag
atctaccccgtgctcaagcgcgccaccctcctcgtggaggacggccagcacgtggagctc
ggtcagcagttcgtggtcggcaacctggacccgaaggaggtgctgcgcgtgcagggcgtc
cgcgccgtgcagctgcacctcgtcgacggtgtgcagggcgtctaccgcagccagggcgtg
ccgatccacgacaagcacatcgaggtcatcgtccgtcagatgctgcgcaaggtgaccgtc
gtcgagcacggcgacaccgagctgctgccgggtgagctcgtcgaccgttcgcggtacaac
gagatcaaccgtgccgcgctgaccgagggcaagaagaccgcctcggcgcgtcaggaggtc
atgggcatcaccaaggcgtcgctggcgaccgagtcgtggctgagtgccgcgtcgttccag
gagaccacccgcgtgctcacgcaggcggcgatggagggtcgctccgacccgctcgtcggt
ctcaaggagaacgtcatcatcggtcagctcatcccggccggtaccggtctctcgaagtac
cgcaacgtgtcggtggatgccacggaggaggcgaaggcggagcgctacccgaaccgcatc
ttcgccgacgactcggcgttcagcgaggcggatctgagcttcgtcgacttcgacagcttc
agctcggacgacttccagcccggcacctacaactga
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integrated database retrieval system
