Protaetiibacter larvae: FLP23_08175
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Entry
FLP23_08175 CDS
T06178
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lyk
Protaetiibacter larvae
Pathway
lyk03030
DNA replication
lyk03430
Mismatch repair
lyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FLP23_08175 (dnaE)
03430 Mismatch repair
FLP23_08175 (dnaE)
03440 Homologous recombination
FLP23_08175 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyk03032
]
FLP23_08175 (dnaE)
03400 DNA repair and recombination proteins [BR:
lyk03400
]
FLP23_08175 (dnaE)
Enzymes [BR:
lyk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FLP23_08175 (dnaE)
DNA replication proteins [BR:
lyk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FLP23_08175 (dnaE)
DNA repair and recombination proteins [BR:
lyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FLP23_08175 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QEO09980
UniProt:
A0A5C1Y8K1
LinkDB
All DBs
Position
1729393..1732908
Genome browser
AA seq
1171 aa
AA seq
DB search
MSSSDSFVHLHVHSEYSMLDGAARVGDLMKAVVEQGMPAIAVTDHGNNFGAFDFWSQANA
AGVKPIIGTEAYLTPGTSRFDKTRVRWGNGGEDDVSGSGAYTHMTMWAENTAGMHNLFRL
SSLASIEGYYFKPRMDRELLQRYATGIIATTGCPSGEVQTRLQLGQYTAAREAAAEFRDI
FGKDNFFVELMDHGLGIERRVMTDLVRLAKDLDLPLVATNDLHYTHAHDSSAHEILLCVQ
SGSTLADPNRFKFDAQEFYLKTPAQMRELFRDHPDACDNTLLIAERCAVEFNTSANYMPR
YPVPDGETEESWFVQEVEKGLHERYPGGIPDEVRKQAEYEVGVIVQMGFPGYFLVVADFI
NWSKDHGIRVGPGRGSGAGSMAAYAMKITDLDPLQHGLIFERFLNPDRVSMPDFDVDFDE
RRRGEVIKYVTEKYGEERVAQIVTYGTIKAKQALKDSGRVLGFPFSMGEKLTKAMPPAIM
GKDIPLGGIVDPAHERYKEAGDFRALLETDADARTVFETARGLEGLKRQWGVHAAGVIMS
SEPLIDIIPIMKREQDGQIVTQFDYPAAEALGLIKMDFLGLRNLTIIDDALDNIEANRGF
RPVLEELALDDPGAYELLGRGDTLGVFQLDGGPMRGLLRLMKPDNFEDISAVLALYRPGP
MGANAHTDYALRKNGQQRIAPIHPELEEPLRDILDTTYGLIVYQEQVMAIAQRVAGFTLG
QADILRRAMGKKKKSELDKQYEGFVAGMKGNGYSDTAIKTLWDILLPFSDYAFNKAHSAA
YGVLSYWTAYLKAHYPAEYMAALLTSVGDARDKLALYLNECRRMGIQVLPPDVNESIGYF
AAVGEDIRFGLGAVRNVGFGVVDQIRDAREQKGAFSSFHDFLRKVPLTALNKRTIESLIK
AGAFDSLGSTRRALIEIHEGAVDQAVKQKREEASGQVGFDFDALLGELDTVEPEVPHRPE
WGKKEKLAFERDMLGLYVSEHPLDGLDVVLAKHRSVTIAELLSSETIQDGETVTVAGLLT
SVQHRTARNSGNPYGVVQLEDFGGEVSVMFLGKTYQEFAPGLVNDAIVVVRARVSQRDDG
VALHAASMFAPDVGQSLGAGPLVIQVAEHRATTEVVTALNDVLIRHRGDNEVRLRLVRGE
SARLFEIPYPVAVTADLYGELKSLLGPNCVV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagcagcgattccttcgtgcacctgcacgtgcacagcgaatacagcatgctcgac
ggcgccgcccgcgtcggcgacctcatgaaggcggtcgtcgagcagggcatgccggccatc
gccgtcaccgaccacggcaacaacttcggcgccttcgacttctggtcgcaggcgaacgcc
gcgggcgtgaagcccatcatcggcaccgaggcgtacctcacgcccggcacctcgcgcttc
gacaagacccgggtgcgctggggcaacggcggcgaggacgacgtctcgggatccggcgcc
tacacccacatgacgatgtgggcggagaacaccgccgggatgcacaacctcttccggctc
tcgagcctcgcctccatcgagggctactacttcaagccccgcatggaccgcgaactgctg
cagcgctacgcgacgggcatcatcgccaccacgggctgcccctccggcgaggtgcagacc
cgcttgcagctcgggcagtacaccgcggcgcgcgaggcggccgccgagttccgcgacatc
ttcggcaaggacaacttcttcgtcgagctcatggaccacgggctcggcatcgagcggcgc
gtcatgaccgacctcgtgcggctcgcgaaggatctcgatctgccgctcgtggccaccaac
gacctgcactacacgcacgcgcacgactcctcggcccacgagatcctgctgtgcgtgcag
tccggctcgaccctcgccgaccccaaccgcttcaagttcgacgcgcaggagttctacctc
aagacccccgcccagatgcgcgagctgttccgcgaccaccccgacgcctgcgacaacacg
ctgctcatcgcggaacgctgcgccgtcgagttcaacacgagcgccaactacatgccgcgc
tacccggtgcccgacggcgagacggaggagagctggttcgtccaggaggtcgagaagggc
ctccacgagcgctacccgggcggcatccccgacgaggtccggaagcaggccgagtacgag
gtcggcgtgatcgtgcagatgggcttccccggctacttcctcgtggtcgccgacttcatc
aactggtcgaaggaccacggcatccgcgtcggcccgggccgcggctcgggcgcggggtcg
atggcggcctacgccatgaagatcaccgatctcgaccccttgcagcacggcctcatcttc
gagcggttcctcaaccccgaccgcgtctcgatgccggacttcgacgtggacttcgacgaa
cgtcgtcgcggcgaggtcatcaagtacgtgaccgagaagtacggcgaggagcgcgtcgcg
cagatcgtcacctacggcacgatcaaggccaagcaggccctcaaggactccgggcgcgtg
ctgggcttcccgttctcgatgggggagaagctcaccaaggcgatgccgcccgccatcatg
ggcaaggacatcccgctcggcggcatcgtcgaccccgctcacgagcgctacaaggaggcc
ggcgacttccgggcgctgctggagaccgacgcggacgcgcgcacggtcttcgagaccgcg
cgcgggctcgaggggctcaagcgccagtggggcgtgcacgcggcgggcgtcatcatgtcg
agcgagccgctcatcgacatcatcccgatcatgaagcgggagcaggacggccagatcgtc
acccagttcgactacccggccgccgaggcgctcggcctcatcaagatggacttcctgggg
ttgcgcaacctcacgatcatcgacgacgccctcgacaacatcgaggcgaaccgcggcttc
cgtcccgtgctcgaggagctcgccctcgacgacccgggtgcctacgaactgctgggtcgc
ggcgacaccctgggcgtcttccagctcgacggcgggcccatgcggggccttctgcggctc
atgaagcccgacaacttcgaagacatctcggccgtgctcgcgctctaccggccggggccg
atgggcgccaacgcccacaccgactacgcgctgcgcaagaacggtcagcagcggatcgcg
cccatccatcccgagctcgaggagccgctgcgcgacatcctcgacacgacctacgggctc
atcgtctaccaggagcaggtgatggccatcgcccagcgggtggcgggcttcaccctcggc
caggccgacatcctgcggcgcgcgatgggcaagaagaagaagtccgagctcgacaagcag
tacgagggcttcgtggccggcatgaagggcaacggctactccgacacggccatcaagacg
ctctgggacatcctgctgccgttctcggactacgccttcaacaaggcccactcggccgcc
tacggggtgctcagctactggacggcctacctcaaggcgcactacccggccgagtacatg
gcggccctgctcacgagtgtcggggatgcccgcgacaagctcgcgctgtacctcaacgag
tgccgccggatgggcatccaggtgctgccgcccgacgtcaacgagtcgatcggctacttc
gcggccgtcggcgaggacatccgcttcggcctgggcgcggtgcgcaacgtcggcttcggg
gtggtcgaccagatccgtgacgcgcgcgagcagaagggcgcgttctcgagcttccacgac
tttctgcgcaaggtgccgttgaccgccctcaacaagcgcaccatcgagtcgctcatcaag
gccggcgccttcgactcgctcgggtcgacgcgccgcgccctcatcgagatccacgagggc
gccgtcgatcaggccgtcaagcagaagcgcgaggaggcgagcgggcaggtcgggttcgac
ttcgacgcgctcctcggggagctcgacacggtcgagcccgaggtgccgcaccggccggag
tggggcaagaaggagaagctcgccttcgaacgcgacatgctgggcctctacgtgtcggag
catcccctcgacggcctggatgtcgtgctggccaagcaccggagcgtgacgatcgccgag
ctgctgtcctcggagacgatccaggacggcgagacggtcacggtggcggggctgctcacg
agcgtgcagcatcgcaccgcccgcaactcgggcaacccgtacggggtcgtgcagctcgag
gacttcggcggcgaggtcagcgtcatgttcctcggcaagacctaccaggagttcgccccg
gggctcgtgaacgatgccatcgtggtggtgcgcgcgcgggtcagtcagcgcgacgacggg
gtcgccctgcacgccgcgagcatgttcgctcccgacgtcgggcagagcctcggcgccggc
ccgctcgtcatccaggtggccgagcaccgtgcgaccaccgaggtcgtcacggccctcaac
gacgtgctgatccggcaccgcggcgacaacgaggtgcggctgcggctcgtgcgcggcgag
tcggcgcgcctcttcgagatcccgtatccggtggcggtgacggccgacctctacggcgag
ctcaagagtcttctcggcccgaactgcgtcgtctag
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