Protaetiibacter larvae: FLP23_09205
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Entry
FLP23_09205 CDS
T06178
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lyk
Protaetiibacter larvae
Brite
KEGG Orthology (KO) [BR:
lyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyk03016
]
FLP23_09205
Enzymes [BR:
lyk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FLP23_09205
Transfer RNA biogenesis [BR:
lyk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FLP23_09205
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QEO10170
UniProt:
A0A5C1Y938
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Position
1941983..1943245
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AA seq
420 aa
AA seq
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MPSPSSPTAGRRVTEHLPTTADADHPEVEVIDTREGYLAAVDALAAGHGPFAVDAERASG
FRYSQRAYLIQVYRRGSGVFLFDPPAIGSFAELAAVMSNEEWILHAASQDLACLREVGLD
PETVFDTELGARLAGLPRVGLATVAEELLGVHLAKAHSAADWSTRPLPQDWLVYAALDVE
LLPDLRDRIGELLDQAGKGEIARQEFAAELDKAPVVRQEPWRRLSGLHALRTPRQLAIAR
ALWAARDEFAQQQDTAPGRLVPDLSLVAAARAQPASKRELAALKDFTGRASRRELDRWWA
AVEAGTADPEPPSVRGTGDGVPAPRLWADRNPDADRRLKKARAAVTERAEQLAIPLENIL
TPDTLRRLAWAPPADQSPEGIDAELARLGARPWQRAELSGLISAAFVEARQPDAAGSPEA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctccctcctcccccacagccggacgccgcgtgactgagcacctccccacgacc
gccgacgccgaccaccccgaagtcgaggtcatcgacacccgcgagggctacctcgccgcc
gtggatgccctcgccgcagggcacggccccttcgccgtcgacgccgagcgcgcgtccggc
ttccgctactcccagcgcgcgtacctcatccaggtgtaccgccgcggatcgggcgtcttc
ctcttcgacccgcccgccatcggctcgttcgccgagctcgcggccgtgatgagcaacgag
gagtggatcctgcacgcggcgagccaggacctcgcctgcctgcgcgaggtggggctcgac
ccggagacggtcttcgacaccgagctcggcgcccgactcgcgggactgccccgggtggga
ctcgccaccgtggccgaggagctgctgggcgtgcacctcgcgaaagcacattccgccgcc
gactggtcgacccgcccgctcccgcaggactggctcgtctacgcggccctcgacgtggag
ctgctgcccgatctgcgcgatcgcatcggagagctcctcgaccaggcggggaagggcgag
atcgcacgtcaggagttcgccgccgagctcgacaaggcgcccgtcgtgcgtcaggagccc
tggcgacggctgtccggcctgcacgcgctccgcaccccccggcagctggccatcgcccgc
gcgctgtgggcggcgcgcgacgagttcgcccagcagcaggacaccgctccgggacgcctc
gtgcccgatctctcgctcgtcgccgcggcgcgcgcgcagcccgccagcaagcgggagctc
gccgcgctcaaggacttcaccggacgcgccagccgccgcgagctcgaccgctggtgggcc
gccgtcgaggccggtaccgcggaccccgagccgccgtcggtccgcgggacgggggacggc
gtgcccgcgccgcgtctgtgggcggatcgcaaccccgacgccgaccgtcggctcaagaag
gcccgggccgcggtcacggagcgcgccgagcagctcgccatcccgctcgagaacatcctg
acccccgacacgctccggcgtctcgcgtgggcgccccccgccgaccagtcgcccgaaggg
atcgatgccgaactggccaggctcggggcccgaccctggcagcgcgccgagttgagcggc
ctcatctcggccgcctttgtggaggcgcgccaacccgacgccgcgggctcccccgaggcg
tag
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