Protaetiibacter larvae: FLP23_10395
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Entry
FLP23_10395 CDS
T06178
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lyk
Protaetiibacter larvae
Pathway
lyk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLP23_10395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyk03021
]
FLP23_10395
03019 Messenger RNA biogenesis [BR:
lyk03019
]
FLP23_10395
Transcription machinery [BR:
lyk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FLP23_10395
Messenger RNA biogenesis [BR:
lyk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FLP23_10395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Extensin_1
AAA_25
Spore_III_AA
AAA
NACHT
Gly_rich_2
TFIIA
Motif
Other DBs
NCBI-ProteinID:
QEO10870
UniProt:
A0A5C1YBD7
LinkDB
All DBs
Position
complement(2206344..2208464)
Genome browser
AA seq
706 aa
AA seq
DB search
MHPARDVLCPGRKDNPVVTDATTSAAAAGDRAALSRLRLPELQALAAERGIVGVSKMRKG
DLVDSLSDLSETESADAPVTEEAPTPAEEAPVEEAPVEEQPAEEAPAEEAPAEEQAPEAA
AEEAPVEGPPAAAPARRGSRRVSAATADAAAIAASLPPLESTEPVAATGRRSAAQHAAQA
ELGLELDKLIPSSTSAESEGEGEGAQPSRRSRNRRGGRGQNGQNGQGAQGQNGQAQNGQA
QNGQQGEQPAGGQQGQNGQQRQNGQQNQGQQNRQAPAGEDADGQFGPDGESRSRNRYRDR
KRGGRGGVVDELEPEISDDDVLIPIAGILDVLDNYAFVRTTGYLPGPSDVYVSLGQVKKY
NLRKGDAVVGAIRQPREGDQASSRQKYNAIVKIDSVNGQTVEEAAGRVDFGKLTPIYPNE
RLRLETTPEKLSTRIIDLIAPIGKGQRGLIVAPPKAGKTLILQAIAKAIAINNPEVHIMV
VLVDERPEEVTDMQRSVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGNDVVVLLDS
ITRLGRAYNLASPASGRILSGGVDASALYPPKRFFGAARNIEGGGSLTILATALVETGSK
MDEVIFEEFKGTGNMELRLSRALADKRIFPAVDLYASSTRREEELLSADEVKITWRLRRA
LAGLELQQQLEVVLSKLKETGSNVEFLVQIQNSLPAGNGNGHAHKE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcacccagctcgggatgttctgtgcccgggtcgaaaggacaatccagtcgtgaccgac
gccaccacctccgcagcagctgcgggggatcgcgccgccctcagccgcctgcggcttccg
gagcttcaggctctggcagccgagcgcggcatcgtcggcgtttccaagatgcgtaaagga
gatctcgtggactctctctccgacctttccgagaccgagagcgctgacgcgcccgtgacc
gaagaggccccgaccccggcggaggaggcccccgtcgaggaggctcccgtcgaggagcag
cctgcggaggaggctcctgcagaggaggctcctgcagaggagcaggcccccgaggcggcc
gcggaggaggctcccgtcgaggggccgcccgccgccgctccggcccgccgcggctcgcgc
cgcgtgagcgccgccacggcggacgccgcggctatcgccgcctcgctgcccccgctcgag
tcgaccgaaccggtcgccgcgacgggtcgccgcagcgccgcccagcacgccgcgcaggcc
gagctcggcctcgagctcgacaagctcatcccgagcagcacctcggccgagtccgagggc
gagggcgagggcgcgcagcccagccgccgcagccgcaaccgccgcggaggccgcggccag
aacggccagaacggccagggcgcccagggccagaacggccaggcccagaacggccaggcc
cagaacggccagcagggcgagcagcccgcgggcggccagcagggtcagaacggccagcag
cgccagaacggccagcagaaccagggccagcagaaccgccaggcccccgcaggcgaggac
gccgacggccagttcggccccgacggcgagagccgcagccgcaaccgctaccgcgaccgc
aagcgcggaggccgtggcggcgtggtcgacgagctcgagccggagatctccgacgacgac
gtgctcatccccatcgcgggcatcctggacgtgctcgacaactacgccttcgtgcgcacc
acgggctaccttcccggcccgagcgacgtctacgtgtcgctcggtcaggtgaagaagtac
aacctgcgcaagggtgatgccgtcgtcggcgccatccgccagccccgcgagggcgaccag
gcctcgagccgccagaagtacaacgcgatcgtcaagatcgactccgtcaacggccagacc
gtcgaggaggcggccggtcgcgtcgacttcggcaagctcaccccgatctaccccaacgag
cgcctgcgtctcgagaccacgcccgagaaactctcgacgcgcatcatcgacctcatcgcg
cccatcgggaagggccagcgcggcctcatcgtcgcgccccccaaggccggcaagacgctc
atcctgcaggcgatcgccaaggccatcgcgatcaacaaccccgaggtccacatcatggtg
gtcctcgtggatgagcgccccgaagaggtcaccgacatgcagcgctcggtgaagggcgag
gtcatcgcctcgaccttcgaccgtcccgccgaggatcacaccacggtcgccgagctcgcc
atcgagcgcgccaagcgcctcgtggagctcggcaacgacgtcgtcgtgctgctcgactcg
atcacccgcctgggtcgcgcctacaacctggcctcgccggcgtccgggcgcatcctctcc
ggcggtgtcgacgcctcggcgctctacccgccgaagcgcttcttcggagccgcccgcaac
atcgagggcggcggatcgctcaccatcctggcgacggcgctcgtggagaccggatccaag
atggatgaggtgatcttcgaggagttcaagggcaccggcaacatggagctgcgcctctcg
cgggccctcgccgacaagcgcatcttcccggcggtcgacctctacgcctcgagcacccgc
cgcgaggaggagctgctctcagccgacgaggtgaagatcacctggcgtctgcgccgcgcg
ctcgcggggctcgaactgcagcagcagctcgaggtggtgctgtcgaagctcaaggagacc
ggctccaacgtcgagttcctcgtgcagatccagaactcgctcccggcgggcaacggcaac
gggcacgcccacaaggagtag
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