Lysinibacillus sp. OF-1: NV349_00020
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Entry
NV349_00020 CDS
T10748
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
lyo Lysinibacillus sp. OF-1
Pathway
lyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NV349_00020 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyo03400
]
NV349_00020 (recF)
DNA repair and recombination proteins [BR:
lyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NV349_00020 (recF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
DUF2813
AAA_21
AAA_29
AAA_27
Pept_S41_N_bact
Motif
Other DBs
NCBI-ProteinID:
WCH47850
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Position
2996..4111
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AA seq
371 aa
AA seq
DB search
MYIEQIKLTNYRNYDALALNFSPKINVFIGENAQGKTNVMESIYVLAMAKSHRTTNDKEL
IRWDSDYGKIEGAVKKRHGILPIELTITKKGKKGKINHIEQSRLSHYIGQMNVVMFAPED
LNVVKGSPQIRRRFIDMEIGQISPVYLHDLLTFQKVLKQRNHFLKMNQGKSMSNDVMYEV
YNEQYIHAATQIIRKRFQFMDLLQEWAEPIHAGISQGKETLVIKYRTVAGIEKEHSTSEI
ENTLHQKLIEAREREFDRGVTLVGPHRDDLQFLVNGYDVQTYGSQGQQRTTALSLKLAEI
ELIKQETKETPILLLDDVLSELDDYRQSHLLNTIQGEVQTFVTTTSVDGIHHETMEQAQL
FHVKQGAIEKS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtatattgagcaaataaaacttacaaattatcgtaactatgatgccttagctttaaac
ttttctccaaaaattaatgtttttattggtgaaaatgctcaaggaaaaacaaatgttatg
gagtccatctatgttttagcaatggctaaatcccatcgaacaacgaacgataaagaattg
atacgttgggattcagactatggtaaaatagaaggggccgttaaaaaaaggcatggtatt
ttaccaatcgaacttacgattacaaagaaaggtaaaaagggcaagataaatcatatagag
caaagtcgcctcagtcattatattggtcaaatgaacgttgttatgtttgcgccagaagac
ttgaacgttgtaaaggggagtcctcaaatacgccgacgttttattgatatggagattggg
caaatttcgcctgtctatttacatgatttattgacctttcaaaaagttttaaaacaacgt
aatcatttcttaaagatgaatcaaggcaagtccatgtcaaatgatgtgatgtatgaggtc
tacaatgaacaatatattcatgcagctacccaaattattcgtaaaagatttcaatttatg
gatttattgcaggagtgggcagaacctatacacgcaggcatatcacaaggtaaggaaaca
ctggttataaaatatcgtacggtagctggtattgaaaaagaacactctaccagtgaaatt
gaaaatactttacatcaaaaattgattgaagcgagagaacgtgaatttgacaggggtgtg
acacttgttggcccacaccgtgatgatttgcagtttttagtaaatggctatgatgttcaa
acttatggctctcaaggacaacaacgtacaactgcattgtctttaaagcttgctgaaatt
gaattaattaaacaagaaacaaaagaaacacccatactacttttagatgatgttttgtcg
gaactcgatgattatcgtcaatcgcatttattaaataccattcaaggtgaagtccaaacc
tttgtaacaactacaagtgtggatggaattcatcatgaaacgatggaacaggctcaactg
ttccacgtgaaacaaggtgcgattgaaaaaagttag
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