Lysinibacillus sp. OF-1: NV349_00025
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Entry
NV349_00025 CDS
T10748
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lyo Lysinibacillus sp. OF-1
Brite
Enzymes [BR:
lyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NV349_00025 (gyrB)
DNA replication proteins [BR:
lyo03032
]
Prokaryotic type
DNA Topoisomerases
NV349_00025 (gyrB)
DNA repair and recombination proteins [BR:
lyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NV349_00025 (gyrB)
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NCBI-ProteinID:
WCH47851
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Position
4204..6138
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AA seq
644 aa
AA seq
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MKAVAIENEGLQNQAYEADQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEIVDNSIDE
ALAGFCTDIQVTIEKENWIRVEDNGRGIPVSIQEKMGKPAVEVIMTVLHAGGKFGGGGYK
VSGGLHGVGASVVNALSVETIVQVHREGHIHEIKFERGKTVQELMVIGETNHNGTTTRFK
ADPEIFKETTVYEYDILAHRIRELAYLNRGIKITIADEREEEVRSTTYHYEGGIRSYVEH
LNQSKEPIHDPIDVLGEKDGISVEIAMQYNAGFSSNIFSFANNINTYEGGTHESGFKTAL
TRVINDYARKNGLLKESDANLTGEDVREGLTAIVSVKHPDPQFEGQTKTKLGNSEVSQIT
NSLFSDGFERFMLENPTVARKVVEKGLMAARARVAAKKAREFTRRKNALEVSSLPGKLAD
CSSTIPADCEIYIVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDKILSNAEIRA
MITAFGTGIGEEFNLEKARYHKIIIMTDADVDGAHIRTLLLTFFFRFLRPLIEAGYIYIA
QPPLYQVKQGKHIEYCYDEETLKEIIERLPKMPKPNVQRYKGLGEMNAEQLWETTMDPEY
RTLLQVELDDAIKANQAFERLMGDEVEPRRQFIEENAVYANLDI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccgtggctatagagaacgaaggtttacaaaaccaagcttatgaagccgatcag
atacaggtactagaaggtttagaggcagtacgtaaaagaccagggatgtatatcggttca
acaagttctaaagggcttcaccatttagtatgggaaattgttgataatagtatcgatgaa
gctcttgcaggattttgtacagatatacaagtaacaattgaaaaagagaactggattcgc
gtagaagataacggtcgaggtattccagttagcattcaagaaaaaatgggtaagccagct
gttgaagttattatgacagttttacatgctggtggtaaatttggcggtggaggctataaa
gtttctggtggtcttcatggagttggggcatcagtggtgaatgcactttctgttgaaaca
attgttcaggttcatcgtgaaggtcatattcatgaaattaagtttgaacgtgggaaaact
gttcaagaattaatggtgatcggtgaaacaaaccacaatggtacaacaacgcgatttaaa
gctgatccagaaatttttaaagaaacgactgtttatgaatatgatattttagctcatcgt
attagagaattggcttatttaaatcgtggtattaagattacgattgctgatgaacgagaa
gaagaggttcgttcaactacatatcactatgaaggtggtattcgatcttatgttgagcat
ttaaaccaatctaaagagccaatccatgatccaattgatgttcttggagagaaggatggc
atctcagtggaaattgctatgcaatacaatgctggattctcctctaatattttttcattt
gctaataatattaatacgtatgaaggcggtacacatgagtctggttttaaaacagccctt
acacgtgttattaacgactatgctcgaaaaaatggattgcttaaagaatctgatgccaat
cttacaggcgaggatgtacgtgaagggttaacagctattgtttctgttaaacatccagat
ccacaatttgaaggacaaacgaaaacaaagctagggaattcagaagtaagtcaaattact
aattcattattctcagatggctttgaacgttttatgttagaaaatccaactgttgctcgt
aaggtagtagaaaaaggtttaatggctgcccgtgcacgtgtagcagcgaaaaaggcacgt
gaatttactcgtcgtaaaaatgcacttgaagtatcaagcttaccgggtaaattagctgac
tgttcttctactatccccgctgattgtgaaatttatattgttgagggtgattcagccggc
ggttcggctaaatctggacgtgaccgtcacttccaagcgattttgcctttacgtggtaag
attcttaacgttgagaaagctcgactagataaaattttatcgaatgcggaaattcgtgca
atgattacagcattcggcacaggtattggtgaagagtttaatttagaaaaagctcgttat
cataaaatcattatcatgacagatgccgatgtcgatggagcacatattcgtacattactt
ttaacattcttcttccgtttccttcgaccacttatagaagcaggctatatttatattgca
cagccaccactttatcaagtgaaacaaggtaagcatattgagtactgctacgatgaagaa
acattaaaagaaattatagaacgactaccaaaaatgccaaaaccaaatgtgcagcgttat
aaaggtcttggtgaaatgaacgctgagcaactttgggaaacaacaatggatccagagtac
cgcacattattacaagtagaattagatgatgcaattaaagctaaccaagcatttgagcgt
ttaatgggcgatgaagttgaacctcgtcgtcaatttatcgaggaaaatgccgtatacgct
aatttagatatctaa
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