Lysinibacillus sp. OF-1: NV349_00210
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Entry
NV349_00210 CDS
T10748
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lyo Lysinibacillus sp. OF-1
Pathway
lyo03030
DNA replication
lyo03430
Mismatch repair
lyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NV349_00210 (dnaX)
03430 Mismatch repair
NV349_00210 (dnaX)
03440 Homologous recombination
NV349_00210 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyo03032
]
NV349_00210 (dnaX)
03400 DNA repair and recombination proteins [BR:
lyo03400
]
NV349_00210 (dnaX)
Enzymes [BR:
lyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NV349_00210 (dnaX)
DNA replication proteins [BR:
lyo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NV349_00210 (dnaX)
DNA repair and recombination proteins [BR:
lyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NV349_00210 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_5
AAA_30
AAA_14
AAA_19
AAA_16
Rad17
AAA_7
Mg_chelatase
TIP49
AAA_24
DnaX_C
AAA_assoc_2
RNA_helicase
AAA_11
PIF1
AAA_18
TsaE
nSTAND3
WHAMM-JMY_N
Motif
Other DBs
NCBI-ProteinID:
WCH47877
LinkDB
All DBs
Position
47032..48816
Genome browser
AA seq
594 aa
AA seq
DB search
MTYQAFYRVYRPQSFREMSGQAHVKRTLQNALLANKTTHAYLFSGPRGTGKTSTAKIFAK
ALNCEHAPSKEPCNECATCISITDGSHPDVIEFDAASNSRVEEIRDIIEKVRFAPASSRY
KVYIIDEVHMLSTSAFNALLKTLEEPPPHAVFILATTEPHKLPATIISRCQRFDFKRLST
NDIIERMKVVLEDIDLPYEEQGLKVIAQSAAGGMRDALSLLDQVVSFSGEKLKLEDTLLV
TGSISQDVFYDLAEALKVKDVAQMLALLEQLIADGKDPLRLSEDLITFFRDLLLLQTSDN
LAELLELVSPEERVFTLAHEFAPDMLYGYIDILAKIQQEMRFSHHTKIYLETALLKMAQF
SGGLAHQTVAMNETVQSSELTQKVVALEQMVQQLSLQLQTGTTVQTTSAQKEQRPRAKNP
NGYKAPTGRIQEVLKDATKQDVQRIKSVWAQALNQMQKSQSALLAEAEPVAASSSAFVLK
FKYDIHCQMVADNQSLKAHFTQLIAGQTGTMYEMLCIPEESWLKMREEFIRDHSLQQKKS
QAVSEHGEELLEPPPAEMPDEPFIDDAQPLASQDPLVTEAEKLFGKDFVEIIED
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtatcaagcattttatcgtgtgtatcgaccgcaatcttttcgagaaatgtctggc
caagcacatgtcaaaagaacgctacaaaatgctctcctagcaaataaaacaacgcatgct
tacttattttctgggccgcgtggtacagggaaaacaagtacagccaaaatctttgcgaag
gctttaaattgtgaacatgcaccatcgaaagaaccgtgtaatgaatgcgctacatgtata
agtattacggatggctcccatcctgatgtcattgaatttgacgcggcttcgaattcacgt
gttgaagagattagggatattatagaaaaggttcgctttgctcctgcaagcagtagatat
aaggtgtacatcatagacgaagtgcatatgctttctacaagtgcctttaacgctctttta
aaaactttggaagagccacctcctcatgctgtatttattttagcaacgacagagcctcac
aaattgcctgcaacgattatttctcgttgtcagcgctttgattttaagcgactttctacc
aatgatattattgaacgtatgaaggtcgtcctagaagatattgatttaccatatgaagaa
caaggtttaaaggtgatcgcacaatcagccgcaggaggaatgcgtgatgctttaagtttg
ctagaccaagttgtgtcatttagtggggaaaaattaaagcttgaggacacattattagtt
acaggttcaattagtcaggatgttttttatgacttagctgaagcattgaaagtaaaagat
gttgctcaaatgctagctcttttagagcaacttatagctgatggcaaggatcccttgcgc
ctttcagaagatttaattacttttttccgcgatttactattacttcaaacaagtgataat
ttagctgaacttttagagttagtgtcccctgaggagcgtgtatttactttagcacacgaa
tttgctccagatatgctttatggctatattgatatactcgcaaaaatacagcaggagatg
cgtttctctcaccatacgaaaatttacttagaaacagcattgcttaaaatggcacaattt
tcgggagggttagcgcatcaaacagtggctatgaacgaaactgtacaaagctcagaactc
acgcaaaaggtggtagcgcttgagcagatggttcaacaattatccttgcagctgcaaaca
ggaactactgtgcaaacgacgtcagcgcaaaaagagcaaagacctcgtgctaaaaacccg
aatggctataaagcacccactggtcgtattcaggaagtgttgaaagatgctacaaagcaa
gatgtgcaacgtatcaagtcggtttgggcacaagcattaaatcaaatgcaaaaatctcaa
tcggctcttttagcagaggctgaacctgttgcggcatcttcgagtgcttttgtgttaaaa
ttcaagtatgatattcattgtcagatggttgccgataaccaatctttaaaggctcacttt
acacaattaattgctgggcaaactggtacaatgtacgagatgctatgtataccagaagaa
tcttggttgaaaatgcgtgaagagtttatccgtgatcacagtctacagcaaaagaaatca
caggctgtctcagagcatggagaagaattattagagccaccaccggcagaaatgccagat
gaaccatttatcgatgatgcccaacctcttgcttcacaagatccacttgtgacagaggct
gaaaagctctttggtaaagattttgttgaaattattgaagattaa
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