Lysinibacillus sp. OF-1: NV349_03445
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Entry
NV349_03445 CDS
T10748
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lyo Lysinibacillus sp. OF-1
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyo03400
]
NV349_03445 (addB)
Enzymes [BR:
lyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NV349_03445 (addB)
DNA repair and recombination proteins [BR:
lyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NV349_03445 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
WCH48454
LinkDB
All DBs
Position
743050..746559
Genome browser
AA seq
1169 aa
AA seq
DB search
MSLRIVSGRSGTGKSAFIHQEIIEQLKTEPLGHPIFIIVPDQMSYSTEYELTNKHGLQGL
IRAQVMTFKRLAWLVLQETGGIARKEVNGYGYRMLIRKLLEEQKSEFSLFRQAAGKRGFT
EEIETLLKEFSRYSVNSSVLAEVTESLKAIDAPNTLQAKANDLHVVLQALEERLGTTYVD
SEGYYPILTEQLKYADTMKQATIYIDGFTAFTVRELELVRELLKVTKQVTIVLPFDHSDE
AFDEQALFHEAALTNQRLHDIANEEGIDVDAPLHFYNTKRFHSEDLQHVEAKFTDLVPKT
KKSSGDVMVLEASNRRAEVHAIAREITKLTREDGYRYQDIVLLYRQAELYDPLITSIFQQ
YEIPIFTNTKKTMLHHPLIELSRSALEVMTSTWKYEPVFRSVKTDLFFPLHAELTIWRER
ADRLENYCLAQGIYGERWFEEARWFYKKYRGLEFHSRVQTDEERAMQAEIEAIRDEIRLP
LKNLQDKLDSAKTGRDIATALFELVESLQVYDKLQAMKDRELERGDALAASEHEQAWNEW
IGVLDQFVYMFGEQEMTLEEAAKILDEGFDTLEFSRIPPTLDEVMVATVDLARLSNIKVT
FVVGMNDGVYPTRMEYEGLLSDTEREWFSQIGYELAPTSTNRLLQENYLFYRAITTPSDK
LYMTYPTADEEGKALLSSLYIKKMIGNDKTAGLLSEVVIERVVMDPIELLNGDVLPYLRH
PRTALAHLMVQLRQAEHSRELAPEWLALQKFYKQDPYWALIFERVLYPITHKNEAEPLET
YITQELYGQKLTSSVSRIEKYFRCPFSHFTTYGLRLEERAEYRLETFAMGDLFHEALKWI
TEETHRQQLSWIRLTTQQIKQLARQAVEQIVPVFSHQILLSSARYRYIQRKLIRIVERTM
TALTQHANVSHFKPIAIEASFGPGQHEQLPPLEIDLTSGKKMFMRGRIDRVDSATIDDRS
YLRVVDYKSSARDLDLNEVYYGLSLQVLTYLDVAMENSSYWLPGQTEPAGVLYVHVHNPM
LKLDKDLTDSEIEEDRLKQYKMKGLLSENAEAILSMDEQLEESSGHSKIIPVYMKKDGTP
SESQSRIVPVNDMKKLQHFVRRKHQEAGNGILSGDTAISPYKLKAKTACDYCQFAAVCQF
DPSDGKQSYRQLAQAKPNDIVDKIRKEME
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgcgtattgtttcaggacgttcaggaacaggaaaatccgcatttattcatcag
gagatcattgaacagcttaaaacggagccattgggacatccgattttcataattgtcccc
gaccagatgtcttattctacagaatatgagttgacgaataagcatggtttacaaggcttg
atccgtgcacaagtgatgacgtttaagcgtttagcgtggctggttttacaggaaactggc
gggattgctcgcaaagaagtgaatggctatggctatcgaatgctcattcgtaaactttta
gaggaacaaaaaagtgagttttccttatttcgacaagcagcaggaaaacgtggctttacg
gaggagattgaaacacttttaaaagaatttagccgctatagcgtcaatagctcagtctta
gcagaggtaacggaatcattaaaagcaattgatgctccaaataccttacaggctaaagca
aatgatttacatgtagtgttacaggccttagaggaacgactaggcacgacatatgtcgac
agtgagggctattatccaattttaacagagcaattgaagtatgctgatacgatgaagcaa
gcaaccatttatattgatggatttaccgccttcactgtacgggagttagaattagtacgt
gagttgttaaaagtaactaaacaagtaaccattgttcttccgtttgatcattcagatgaa
gcgtttgatgaacaggcactattccatgaggcggctttaacaaatcaacggttgcatgac
atcgccaatgaagagggcatcgatgttgatgcaccattacatttttacaatactaaaagg
ttccattctgaagatttgcagcatgtggaggctaaatttactgatttggtgcccaaaacg
aaaaaatcttctggagatgtgatggtacttgaagcgtctaatcgtcgagccgaagtacat
gcgattgcccgggaaataacaaagctgacaagagaagacggttatcgttatcaggatata
gttcttttatatagacaagcagagctatatgatccacttattacaagtattttccaacaa
tatgaaattcctatttttacaaatacaaaaaagacgatgttacatcatccactaatcgag
ctaagtcgttctgcactagaggtcatgacgtctacttggaagtacgaacctgtttttcgt
agtgtgaaaacagatttatttttcccattacatgctgagctaaccatctggcgtgagcga
gcagatcgattagaaaactattgcttggcacaaggcatctatggagaacggtggtttgag
gaggcacgttggttttataaaaagtatcgtggattagaattccattcgcgtgttcaaaca
gatgaggaacgtgctatgcaggcggaaatcgaggctattcgagatgaaattcgtctaccg
ttaaagaatttacaagataagcttgatagtgcgaaaacgggtagagatattgcgactgca
ttatttgagctagtggagtcattacaggtttatgataagcttcaagcaatgaaagatcgt
gagctagagcgaggtgacgcattagcagcgagtgaacatgagcaagcttggaacgaatgg
attggtgttcttgaccaattcgtctatatgtttggggagcaagaaatgactttggaggaa
gcagctaaaattcttgatgaagggtttgatacgctagaattttctcgcattccgccgacc
ttagatgaggtcatggtcgctactgttgatttagccagattgtctaatatcaaagttact
tttgtagtgggtatgaatgatggtgtttatccaactcgaatggaatatgagggtttattg
tcagatacagagcgagaatggtttagccaaattggctacgagcttgcaccaacctccacc
aatcgtttattacaggaaaattacttattctaccgtgctattacaacaccatctgacaag
ctgtatatgacatatcctacggcagatgaagagggcaaggcactgctatcctctctttat
atcaagaaaatgattggcaatgataaaacagctggtttattaagtgaagttgtcattgag
cgagtggtgatggatcccattgaattacttaacggagatgttttaccctatttacgccac
cctcgtacggctttagcgcatctgatggtgcagttacgtcaagctgagcatagccgtgaa
ctagcaccagaatggctagcattacaaaaattttataaacaagatccgtattgggcactc
atttttgagcgtgtcctctatccgattacccataaaaatgaagctgagccacttgaaaca
tatattacacaggaattatatggtcagaagttaacatcaagtgtgtcacgaatcgagaaa
tactttagatgtccattttctcatttcactacgtatggtctacgtttagaagaacgtgct
gaataccgacttgaaacctttgcgatgggtgatttattccacgaggcattaaagtggatt
acagaagaaacacatcgccagcagttatcatggattcgtttaacaacacagcaaattaaa
caattagcacgacaagcagtagagcaaattgtgcctgtcttttcacatcaaattttattg
tcgagtgctcgttatcgctatattcagcgtaagcttattcgcattgttgagcgcacaatg
actgcactgacacagcatgctaatgtgtcccatttcaagcctattgctattgaggcgtcg
tttggtccagggcagcatgaacagctaccaccacttgaaatcgatttgactagcggcaag
aaaatgtttatgcgaggacgcattgatagagtggatagtgcaacaatcgatgatcgttct
tatttgcgggttgtcgactataaatcatcagctcgagatctggatttaaatgaggtttat
tatggattgtccttacaagtccttacgtatttagatgtagcaatggaaaatagctcttat
tggctacctggtcaaactgaaccagctggagtactgtatgtccatgtccataatccaatg
ttaaagctagataaggatttaacagatagtgaaatagaggaagatcgattaaagcaatat
aaaatgaagggcctactgtcagaaaatgctgaggcgattttatcgatggacgagcaatta
gaagaaagtagtgggcactcaaaaattattcctgtatatatgaaaaaggatgggacaccg
tctgaatcacaatcacgcattgttcctgtcaatgatatgaaaaagttacaacatttcgtt
cgacgtaaacatcaggaagcagggaatggcattttatctggtgatacagccattagcccc
tataaattaaaagccaaaacagcatgtgattactgtcaattcgccgcggtttgtcaattt
gatccttcagatggtaaacaaagctatcgtcagttggcgcaagcgaagccgaatgacatt
gttgataaaattcggaaggagatggagtag
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integrated database retrieval system
