KEGG   Lysinibacillus sp. OF-1: NV349_03835
Entry
NV349_03835       CDS       T10748                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lyo  Lysinibacillus sp. OF-1
Pathway
lyo00010  Glycolysis / Gluconeogenesis
lyo00020  Citrate cycle (TCA cycle)
lyo00260  Glycine, serine and threonine metabolism
lyo00280  Valine, leucine and isoleucine degradation
lyo00310  Lysine degradation
lyo00380  Tryptophan metabolism
lyo00620  Pyruvate metabolism
lyo00630  Glyoxylate and dicarboxylate metabolism
lyo00640  Propanoate metabolism
lyo00670  One carbon pool by folate
lyo00785  Lipoic acid metabolism
lyo01100  Metabolic pathways
lyo01110  Biosynthesis of secondary metabolites
lyo01120  Microbial metabolism in diverse environments
lyo01200  Carbon metabolism
lyo01210  2-Oxocarboxylic acid metabolism
lyo01240  Biosynthesis of cofactors
Module
lyo_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lyo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lyo_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lyo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NV349_03835 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NV349_03835 (lpdA)
   00620 Pyruvate metabolism
    NV349_03835 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NV349_03835 (lpdA)
   00640 Propanoate metabolism
    NV349_03835 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NV349_03835 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NV349_03835 (lpdA)
   00310 Lysine degradation
    NV349_03835 (lpdA)
   00380 Tryptophan metabolism
    NV349_03835 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NV349_03835 (lpdA)
   00670 One carbon pool by folate
    NV349_03835 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lyo04147]
    NV349_03835 (lpdA)
Enzymes [BR:lyo01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NV349_03835 (lpdA)
Exosome [BR:lyo04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NV349_03835 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored HI0933_like NAD_binding_8 DAO FAD_binding_2 3HCDH_N AlaDh_PNT_C Thi4 FAD_binding_3 Lys_Orn_oxgnase Lycopene_cycl NAD_binding_9 Trp_halogenase HTH_AsnC-type euk_SelB_III
Other DBs
NCBI-ProteinID: WCH48528
LinkDB
Position
828119..829459
AA seq 446 aa
MEKFDIAIIGAGPGGYVAAIHAAKHGKKVALIERDKLGGACYNVGCIPSKILLEHSKLVQ
EIKRGTSWGIAVPQVEIHFPRLMQRKDTIIQELLNNIEHYIVSNQITLYRGEASVAKDLT
ITIGNETIMATDIILATGSKPFVPPFEGLATSTYFTTDTFFDIDELPAQLTIIGGGVIAV
EMAFSLAPLGTKVTLLNHSEDILQTEEAEARPLIREKMKKLNIELVTDFKFEKFEGNSIH
TSKGAYTYENLLFATGRRPNTEIAQQLGLTLDGRLIAVDEHLQTSQPHVYAIGDLVDGYQ
LAHSASAEGIYVVDYIVGKQPTSIDQTSIPRCVYTHPEIATFGLLEEQVTIPYTVTKMPL
QTNPKALMEGNTEGFVKLIAAEESGQILGACVVADGATEMLNAILATKNAGGTAQSLAQM
IFPHPTVSEHIGDAAKAVFGKAIHQS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggaaaaatttgatattgctatcattggagcgggaccaggtggttatgtggctgccata
catgcagcgaaacatggcaaaaaggttgctctcatcgaacgggataagctagggggagcc
tgttataatgttggctgcattccttcaaaaattttattagagcatagtaagcttgtacag
gaaattaaacgagggacgagctggggaattgcagtgcctcaagtggaaattcattttcct
cgattgatgcagcgaaaagatacaattattcaagagctgttaaacaatattgagcactat
attgtcagcaatcagattactttatatcgtggtgaggcctctgtcgcaaaggatttaacg
attacaattgggaatgagacgataatggctacagatattattttagcgacaggcagtaaa
ccatttgtccccccatttgagggtttagcaacttcgacctattttacaacggatacattt
tttgatatagacgagttaccagctcaattaaccattattgggggtggggtaattgcagtt
gaaatggcctttagtttagcgccacttggtacaaaggtaacgttactgaatcatagtgag
gacatattacaaacggaagaggctgaagcaagaccgctgattcgagaaaaaatgaaaaaa
cttaatatcgagcttgtgacagatttcaagtttgaaaagtttgaaggcaatagcatccat
acatctaaaggtgcttatacatatgaaaatctcttatttgcaactggtcgtcgtcccaat
acagaaatcgctcagcaattaggcttaactttagatggtcgattaattgcagtggatgaa
catttacagacaagtcagccacatgtttatgccataggtgacttagtagatggttatcag
ctagcgcattctgccagtgctgaaggcatttacgttgtcgattatattgtgggcaaacag
ccaacatcaattgaccaaacttcaattcctcgttgcgtttatacacatccggaaattgct
acatttggtttattagaggagcaggtcacaataccttacaccgtaaccaaaatgccacta
cagacaaatcctaaggcattaatggaggggaatacagaaggctttgtgaagttaattgca
gcagaggaaagtggtcaaattttaggtgcatgtgttgtagccgatggtgccacagaaatg
cttaatgctatattggcaacaaaaaatgcaggtggtacagcccaatcacttgcgcagatg
atcttcccacatccaacggtgtcggagcatattggagatgccgcaaaggctgtttttggg
aaagcaattcaccaatcataa

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