Lysinibacillus sp. OF-1: NV349_04565
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Entry
NV349_04565 CDS
T10748
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lyo Lysinibacillus sp. OF-1
Pathway
lyo00470
D-Amino acid metabolism
lyo00550
Peptidoglycan biosynthesis
lyo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NV349_04565 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NV349_04565 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lyo01011
]
NV349_04565 (murD)
Enzymes [BR:
lyo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NV349_04565 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lyo01011
]
Precursor biosynthesis
Amino acid ligase
NV349_04565 (murD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
NAD_binding_7
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
WCH48668
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Position
981053..982402
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AA seq
449 aa
AA seq
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MKNYTDLQHKKVLVLGLAKSGVAAAEILHELGAFVTVNDSKPFDESPDAQGLLQKGITVI
CGRHPEDLLDEGFELVVKNPGIPYSNRIVADALRREIPVWTEIELAYLISDAPFIGITGS
NGKTTTTTLIFDMLNSGSKNPLIAGNIGTVACGVAKEANKDDIIVTELSSFQLMGIKTFK
PKIAILTNLYDAHLDYHGTFDNYAGAKFGVTRNQDDSDYFIYNADQPIVVGYAAQSNAQK
VPFSSKGRTTSGISADETTIYWQGEPYMERAHIALPGKHNLENILAAVAACILVGCDKAK
MEEVLATFGGVRHRTQFVREWNGRKIYNDSKATNCLATKSALDAFQAPIILLAGGLDRGH
SFEELRPCMQHVKGVVAFGETGLRFVEFAKSCGVQQTVIAQNVEDAVHYAAPMSAEGDII
LLSPACASWDQYDSFEIRGDVFIDAVMKL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactatacagatttacaacataaaaaagtacttgtgttaggtctagcaaagagt
ggtgtagccgctgctgaaattttacatgagcttggcgcctttgtaaccgtcaatgattcc
aaaccatttgatgaaagtccagatgcacaaggtttattacaaaaggggattacagtgatt
tgtggtcgtcatcctgaagatttactagatgaaggctttgaattagtagtcaaaaatcct
gggataccatatagcaatcgaattgtggctgatgcccttcgtcgtgaaatacctgtctgg
acagagattgagcttgcttatttaattagcgatgcgccatttattggtataacaggatca
aatggcaaaaccacaacgacaactttaatttttgatatgttaaatagtgggagtaaaaat
cctctaattgcggggaatattgggacagtagcctgtggtgtcgcaaaagaagctaataaa
gatgacatcattgtaactgaattgtcttcattccaattgatgggaataaaaacgtttaag
ccaaaaatcgctattttaacaaatctttatgatgcacatcttgattatcatgggacattt
gacaattatgctggagcaaagtttggtgtgacacgtaatcaagatgatagtgattatttt
atttataatgcggatcaaccgattgttgttggatatgcagcacaatcgaatgctcaaaaa
gttccattcagttcaaagggacgtactacaagcggcattagtgcagatgagacaacgatt
tattggcaaggtgagccatatatggagcgtgctcatatcgccctgcctggcaagcataat
ttagaaaacatcctagcagccgttgcagcttgtattttagttggctgtgacaaggcgaag
atggaagaggtgttagcgacttttggtggcgttcgtcaccgtacacaattcgttcgcgaa
tggaatggtcgaaagatttacaatgattctaaggcaaccaactgcttagcaacaaagagt
gctttagatgctttccaagcacctattattttactcgcaggtggcttagatcgtggacat
tcttttgaagaacttcgcccttgtatgcagcatgtaaaaggtgttgttgcatttggagaa
acaggcttacgctttgtagaatttgcaaagtcgtgtggtgtccaacagacagtcattgcc
caaaatgtagaagacgctgtacactatgcagcaccgatgtcggcagagggagatattatc
ttactatctccagcatgtgcaagctgggatcaatatgacagctttgaaatacgcggagat
gtttttattgatgctgtaatgaagctgtaa
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